Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.77■□□□□ 0.28
CSNK1G3Q9Y6M4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CSNK1G3Q9Y6M4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CSNK1G3Q9Y6M4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CSNK1G3Q9Y6M4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.77■□□□□ 0.28
CSNK1G3Q9Y6M4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CSNK1G3Q9Y6M4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CSNK1G3Q9Y6M4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.77■□□□□ 0.28
CSNK1G3Q9Y6M4 AL645939.2-201ENST00000427340 991 ntBASIC16.77■□□□□ 0.28
CSNK1G3Q9Y6M4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CSNK1G3Q9Y6M4 AL513480.1-201ENST00000451731 511 ntBASIC16.77■□□□□ 0.28
CSNK1G3Q9Y6M4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
CSNK1G3Q9Y6M4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.77■□□□□ 0.28
CSNK1G3Q9Y6M4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CSNK1G3Q9Y6M4 ACTL9-202ENST00000612068 1252 ntBASIC16.77■□□□□ 0.28
CSNK1G3Q9Y6M4 AC092902.6-201ENST00000641783 218 ntBASIC16.77■□□□□ 0.28
CSNK1G3Q9Y6M4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CSNK1G3Q9Y6M4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CSNK1G3Q9Y6M4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CSNK1G3Q9Y6M4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CSNK1G3Q9Y6M4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CSNK1G3Q9Y6M4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
CSNK1G3Q9Y6M4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CSNK1G3Q9Y6M4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CSNK1G3Q9Y6M4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.77■□□□□ 0.27
CSNK1G3Q9Y6M4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CSNK1G3Q9Y6M4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 AC087163.2-201ENST00000457299 853 ntBASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 RFPL4AP1-201ENST00000530883 850 ntBASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 REXO1L3P-201ENST00000622202 1288 ntBASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1G3Q9Y6M4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 AC004835.2-201ENST00000603762 682 ntBASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 AL513210.1-201ENST00000629608 234 ntBASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms