Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.77■□□□□ 0.28
RNF11Q9Y3C5 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF11Q9Y3C5 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF11Q9Y3C5 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF11Q9Y3C5 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF11Q9Y3C5 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF11Q9Y3C5 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF11Q9Y3C5 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF11Q9Y3C5 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF11Q9Y3C5 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF11Q9Y3C5 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF11Q9Y3C5 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF11Q9Y3C5 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF11Q9Y3C5 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.77■□□□□ 0.28
RNF11Q9Y3C5 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.77■□□□□ 0.28
RNF11Q9Y3C5 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF11Q9Y3C5 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
RNF11Q9Y3C5 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
RNF11Q9Y3C5 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF11Q9Y3C5 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
RNF11Q9Y3C5 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.77■□□□□ 0.28
RNF11Q9Y3C5 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF11Q9Y3C5 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.77■□□□□ 0.28
RNF11Q9Y3C5 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF11Q9Y3C5 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RNF11Q9Y3C5 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
RNF11Q9Y3C5 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.77■□□□□ 0.28
RNF11Q9Y3C5 AP000867.3-201ENST00000524675 377 ntBASIC16.77■□□□□ 0.28
RNF11Q9Y3C5 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.77■□□□□ 0.28
RNF11Q9Y3C5 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF11Q9Y3C5 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.77■□□□□ 0.28
RNF11Q9Y3C5 AL445228.2-201ENST00000605589 952 ntBASIC16.77■□□□□ 0.28
RNF11Q9Y3C5 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.77■□□□□ 0.28
RNF11Q9Y3C5 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.77■□□□□ 0.28
RNF11Q9Y3C5 AC073592.5-201ENST00000624854 528 ntBASIC16.77■□□□□ 0.28
RNF11Q9Y3C5 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF11Q9Y3C5 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
RNF11Q9Y3C5 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
RNF11Q9Y3C5 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.77■□□□□ 0.27
RNF11Q9Y3C5 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.77■□□□□ 0.27
RNF11Q9Y3C5 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF11Q9Y3C5 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.77■□□□□ 0.27
RNF11Q9Y3C5 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RNF11Q9Y3C5 LINC00554-201ENST00000564841 3011 ntBASIC16.77■□□□□ 0.27
RNF11Q9Y3C5 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.77■□□□□ 0.27
RNF11Q9Y3C5 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF11Q9Y3C5 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
RNF11Q9Y3C5 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.77■□□□□ 0.27
RNF11Q9Y3C5 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.77■□□□□ 0.27
RNF11Q9Y3C5 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF11Q9Y3C5 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
RNF11Q9Y3C5 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 AC005915.1-201ENST00000624912 2018 ntBASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 ARMC10P1-201ENST00000313754 855 ntBASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 KLF4P1-201ENST00000412782 1185 ntBASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 AC069148.1-201ENST00000608741 768 ntBASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.76■□□□□ 0.27
RNF11Q9Y3C5 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF11Q9Y3C5 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF11Q9Y3C5 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RNF11Q9Y3C5 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF11Q9Y3C5 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF11Q9Y3C5 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms