Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 PCDHB17P-201ENST00000539533 2393 ntBASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 AC092068.3-201ENST00000587894 2016 ntBASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 AC092053.1-201ENST00000605787 1936 ntBASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 RPS2P55-201ENST00000397318 883 ntBASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 AC002558.1-201ENST00000488906 803 ntBASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 AC107956.1-201ENST00000494359 873 ntBASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 AC112698.1-201ENST00000510299 916 ntBASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 AC078925.2-201ENST00000624013 1973 ntBASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 RNF216P1-203ENST00000404404 2427 ntBASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCNIP3Q9Y2W7 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.4□□□□□ -0.11
KCNIP3Q9Y2W7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 AC026471.5-201ENST00000615068 467 ntBASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 KRT8P9-201ENST00000558927 1449 ntBASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.39□□□□□ -0.11
KCNIP3Q9Y2W7 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms