Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHA4Q9UN74 AC022211.2-201ENST00000585075 2527 ntBASIC19.57■□□□□ 0.72
PCDHA4Q9UN74 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PCDHA4Q9UN74 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHA4Q9UN74 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PCDHA4Q9UN74 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHA4Q9UN74 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
PCDHA4Q9UN74 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHA4Q9UN74 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHA4Q9UN74 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHA4Q9UN74 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHA4Q9UN74 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHA4Q9UN74 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHA4Q9UN74 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHA4Q9UN74 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
PCDHA4Q9UN74 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHA4Q9UN74 AL121761.2-201ENST00000598007 1648 ntBASIC19.56■□□□□ 0.72
PCDHA4Q9UN74 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHA4Q9UN74 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHA4Q9UN74 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
PCDHA4Q9UN74 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHA4Q9UN74 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHA4Q9UN74 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHA4Q9UN74 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHA4Q9UN74 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHA4Q9UN74 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHA4Q9UN74 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHA4Q9UN74 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHA4Q9UN74 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHA4Q9UN74 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHA4Q9UN74 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
PCDHA4Q9UN74 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHA4Q9UN74 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHA4Q9UN74 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 SLC25A6P2-201ENST00000497974 877 ntBASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PCDHA4Q9UN74 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHA4Q9UN74 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHA4Q9UN74 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHA4Q9UN74 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHA4Q9UN74 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHA4Q9UN74 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PCDHA4Q9UN74 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PCDHA4Q9UN74 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHA4Q9UN74 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHA4Q9UN74 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHA4Q9UN74 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHA4Q9UN74 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHA4Q9UN74 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHA4Q9UN74 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDHA4Q9UN74 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHA4Q9UN74 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PCDHA4Q9UN74 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDHA4Q9UN74 AC108073.2-201ENST00000464002 357 ntBASIC19.54■□□□□ 0.72
PCDHA4Q9UN74 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHA4Q9UN74 UNC93B6-202ENST00000528242 690 ntBASIC19.54■□□□□ 0.72
PCDHA4Q9UN74 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.54■□□□□ 0.72
PCDHA4Q9UN74 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDHA4Q9UN74 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHA4Q9UN74 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHA4Q9UN74 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms