Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.27■□□□□ 0.52
SIX4Q9UIU6 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.27■□□□□ 0.52
SIX4Q9UIU6 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.27■□□□□ 0.52
SIX4Q9UIU6 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIX4Q9UIU6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SIX4Q9UIU6 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIX4Q9UIU6 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SIX4Q9UIU6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
SIX4Q9UIU6 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SIX4Q9UIU6 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
SIX4Q9UIU6 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
SIX4Q9UIU6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.27■□□□□ 0.51
SIX4Q9UIU6 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SIX4Q9UIU6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIX4Q9UIU6 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
SIX4Q9UIU6 AC080080.1-201ENST00000625121 2420 ntBASIC18.26■□□□□ 0.51
SIX4Q9UIU6 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIX4Q9UIU6 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIX4Q9UIU6 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIX4Q9UIU6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.26■□□□□ 0.51
SIX4Q9UIU6 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIX4Q9UIU6 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.26■□□□□ 0.51
SIX4Q9UIU6 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.26■□□□□ 0.51
SIX4Q9UIU6 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SIX4Q9UIU6 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.26■□□□□ 0.51
SIX4Q9UIU6 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.26■□□□□ 0.51
SIX4Q9UIU6 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.26■□□□□ 0.51
SIX4Q9UIU6 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.26■□□□□ 0.51
SIX4Q9UIU6 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.26■□□□□ 0.51
SIX4Q9UIU6 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SIX4Q9UIU6 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.26■□□□□ 0.51
SIX4Q9UIU6 AC092865.6-201ENST00000642101 219 ntBASIC18.26■□□□□ 0.51
SIX4Q9UIU6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.26■□□□□ 0.51
SIX4Q9UIU6 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SIX4Q9UIU6 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIX4Q9UIU6 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SIX4Q9UIU6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIX4Q9UIU6 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.26■□□□□ 0.51
SIX4Q9UIU6 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIX4Q9UIU6 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.25■□□□□ 0.51
SIX4Q9UIU6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIX4Q9UIU6 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIX4Q9UIU6 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SIX4Q9UIU6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.25■□□□□ 0.51
SIX4Q9UIU6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIX4Q9UIU6 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIX4Q9UIU6 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIX4Q9UIU6 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIX4Q9UIU6 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SIX4Q9UIU6 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.25■□□□□ 0.51
SIX4Q9UIU6 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SIX4Q9UIU6 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.25■□□□□ 0.51
SIX4Q9UIU6 AC023274.1-201ENST00000418278 595 ntBASIC18.25■□□□□ 0.51
SIX4Q9UIU6 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.25■□□□□ 0.51
SIX4Q9UIU6 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.25■□□□□ 0.51
SIX4Q9UIU6 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.25■□□□□ 0.51
SIX4Q9UIU6 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SIX4Q9UIU6 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.25■□□□□ 0.51
SIX4Q9UIU6 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.25■□□□□ 0.51
SIX4Q9UIU6 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.25■□□□□ 0.51
SIX4Q9UIU6 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.25■□□□□ 0.51
SIX4Q9UIU6 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.25■□□□□ 0.51
SIX4Q9UIU6 AL513190.1-201ENST00000621254 727 ntBASIC18.25■□□□□ 0.51
SIX4Q9UIU6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIX4Q9UIU6 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
SIX4Q9UIU6 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIX4Q9UIU6 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SIX4Q9UIU6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIX4Q9UIU6 TOP3BP1-201ENST00000420768 1380 ntBASIC18.25■□□□□ 0.51
SIX4Q9UIU6 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SIX4Q9UIU6 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SIX4Q9UIU6 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.25■□□□□ 0.51
SIX4Q9UIU6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SIX4Q9UIU6 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SIX4Q9UIU6 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SIX4Q9UIU6 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SIX4Q9UIU6 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIX4Q9UIU6 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SIX4Q9UIU6 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIX4Q9UIU6 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIX4Q9UIU6 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SIX4Q9UIU6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIX4Q9UIU6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SIX4Q9UIU6 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIX4Q9UIU6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.24■□□□□ 0.51
SIX4Q9UIU6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIX4Q9UIU6 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SIX4Q9UIU6 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIX4Q9UIU6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIX4Q9UIU6 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SIX4Q9UIU6 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIX4Q9UIU6 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIX4Q9UIU6 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SIX4Q9UIU6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SIX4Q9UIU6 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIX4Q9UIU6 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
SIX4Q9UIU6 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.24■□□□□ 0.51
SIX4Q9UIU6 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.24■□□□□ 0.51
SIX4Q9UIU6 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.24■□□□□ 0.51
SIX4Q9UIU6 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms