Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CALYQ9NYX4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CALYQ9NYX4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CALYQ9NYX4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CALYQ9NYX4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CALYQ9NYX4 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CALYQ9NYX4 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CALYQ9NYX4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CALYQ9NYX4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.21□□□□□ -0.13
CALYQ9NYX4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.21□□□□□ -0.13
CALYQ9NYX4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CALYQ9NYX4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CALYQ9NYX4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CALYQ9NYX4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CALYQ9NYX4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CALYQ9NYX4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CALYQ9NYX4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CALYQ9NYX4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CALYQ9NYX4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CALYQ9NYX4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CALYQ9NYX4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CALYQ9NYX4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CALYQ9NYX4 LINC00982-205ENST00000420957 435 ntBASIC14.21□□□□□ -0.13
CALYQ9NYX4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.21□□□□□ -0.13
CALYQ9NYX4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.21□□□□□ -0.13
CALYQ9NYX4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.21□□□□□ -0.13
CALYQ9NYX4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CALYQ9NYX4 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.21□□□□□ -0.13
CALYQ9NYX4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.21□□□□□ -0.13
CALYQ9NYX4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.21□□□□□ -0.13
CALYQ9NYX4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CALYQ9NYX4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.21□□□□□ -0.13
CALYQ9NYX4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CALYQ9NYX4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CALYQ9NYX4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CALYQ9NYX4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.21□□□□□ -0.13
CALYQ9NYX4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CALYQ9NYX4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CALYQ9NYX4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CALYQ9NYX4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CALYQ9NYX4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CALYQ9NYX4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.21□□□□□ -0.14
CALYQ9NYX4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CALYQ9NYX4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CALYQ9NYX4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CALYQ9NYX4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.21□□□□□ -0.14
CALYQ9NYX4 AL356309.3-201ENST00000624132 1934 ntBASIC14.21□□□□□ -0.14
CALYQ9NYX4 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CALYQ9NYX4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CALYQ9NYX4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.21□□□□□ -0.14
CALYQ9NYX4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
CALYQ9NYX4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CALYQ9NYX4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.2□□□□□ -0.14
CALYQ9NYX4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CALYQ9NYX4 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CALYQ9NYX4 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CALYQ9NYX4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CALYQ9NYX4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.2□□□□□ -0.14
CALYQ9NYX4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CALYQ9NYX4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CALYQ9NYX4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CALYQ9NYX4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CALYQ9NYX4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.2□□□□□ -0.14
CALYQ9NYX4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.2□□□□□ -0.14
CALYQ9NYX4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.2□□□□□ -0.14
CALYQ9NYX4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CALYQ9NYX4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CALYQ9NYX4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CALYQ9NYX4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.2□□□□□ -0.14
CALYQ9NYX4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CALYQ9NYX4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CALYQ9NYX4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CALYQ9NYX4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.2□□□□□ -0.14
CALYQ9NYX4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.2□□□□□ -0.14
CALYQ9NYX4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CALYQ9NYX4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CALYQ9NYX4 MTDHP3-201ENST00000594186 672 ntBASIC14.2□□□□□ -0.14
CALYQ9NYX4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.2□□□□□ -0.14
CALYQ9NYX4 AL022326.1-202ENST00000641533 845 ntBASIC14.2□□□□□ -0.14
CALYQ9NYX4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CALYQ9NYX4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CALYQ9NYX4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
CALYQ9NYX4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CALYQ9NYX4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.2□□□□□ -0.14
CALYQ9NYX4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CALYQ9NYX4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CALYQ9NYX4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CALYQ9NYX4 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CALYQ9NYX4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CALYQ9NYX4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CALYQ9NYX4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.2□□□□□ -0.14
CALYQ9NYX4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.2□□□□□ -0.14
CALYQ9NYX4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
CALYQ9NYX4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.2□□□□□ -0.14
CALYQ9NYX4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.19□□□□□ -0.14
CALYQ9NYX4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CALYQ9NYX4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CALYQ9NYX4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CALYQ9NYX4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.19□□□□□ -0.14
CALYQ9NYX4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms