Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SNX18Q96RF0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNX18Q96RF0 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SNX18Q96RF0 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNX18Q96RF0 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNX18Q96RF0 AC022188.1-201ENST00000620960 1664 ntBASIC15.7■□□□□ 0.1
SNX18Q96RF0 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.7■□□□□ 0.1
SNX18Q96RF0 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNX18Q96RF0 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX18Q96RF0 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.69■□□□□ 0.1
SNX18Q96RF0 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SNX18Q96RF0 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SNX18Q96RF0 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.69■□□□□ 0.1
SNX18Q96RF0 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.69■□□□□ 0.1
SNX18Q96RF0 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX18Q96RF0 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.69■□□□□ 0.1
SNX18Q96RF0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SNX18Q96RF0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.69■□□□□ 0.1
SNX18Q96RF0 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SNX18Q96RF0 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX18Q96RF0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.69■□□□□ 0.1
SNX18Q96RF0 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SNX18Q96RF0 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.69■□□□□ 0.1
SNX18Q96RF0 SPDYE13P-201ENST00000445314 798 ntBASIC15.69■□□□□ 0.1
SNX18Q96RF0 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.69■□□□□ 0.1
SNX18Q96RF0 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.69■□□□□ 0.1
SNX18Q96RF0 GUSBP12-201ENST00000513727 720 ntBASIC15.69■□□□□ 0.1
SNX18Q96RF0 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.69■□□□□ 0.1
SNX18Q96RF0 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.69■□□□□ 0.1
SNX18Q96RF0 RNF126P1-202ENST00000569893 925 ntBASIC15.69■□□□□ 0.1
SNX18Q96RF0 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.69■□□□□ 0.1
SNX18Q96RF0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
SNX18Q96RF0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SNX18Q96RF0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.69■□□□□ 0.1
SNX18Q96RF0 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX18Q96RF0 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX18Q96RF0 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX18Q96RF0 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.69■□□□□ 0.1
SNX18Q96RF0 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX18Q96RF0 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SNX18Q96RF0 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX18Q96RF0 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SNX18Q96RF0 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.69■□□□□ 0.1
SNX18Q96RF0 CROCCP1-201ENST00000426910 5675 ntBASIC15.69■□□□□ 0.1
SNX18Q96RF0 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
SNX18Q96RF0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX18Q96RF0 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.69■□□□□ 0.1
SNX18Q96RF0 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX18Q96RF0 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SNX18Q96RF0 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX18Q96RF0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNX18Q96RF0 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.68■□□□□ 0.1
SNX18Q96RF0 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.68■□□□□ 0.1
SNX18Q96RF0 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SNX18Q96RF0 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SNX18Q96RF0 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNX18Q96RF0 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
SNX18Q96RF0 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNX18Q96RF0 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNX18Q96RF0 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNX18Q96RF0 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNX18Q96RF0 AC116353.5-201ENST00000638148 1699 ntBASIC15.68■□□□□ 0.1
SNX18Q96RF0 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNX18Q96RF0 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNX18Q96RF0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.68■□□□□ 0.1
SNX18Q96RF0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNX18Q96RF0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNX18Q96RF0 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.68■□□□□ 0.1
SNX18Q96RF0 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.68■□□□□ 0.1
SNX18Q96RF0 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.68■□□□□ 0.1
SNX18Q96RF0 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.68■□□□□ 0.1
SNX18Q96RF0 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SNX18Q96RF0 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.68■□□□□ 0.1
SNX18Q96RF0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.68■□□□□ 0.1
SNX18Q96RF0 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.68■□□□□ 0.1
SNX18Q96RF0 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNX18Q96RF0 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNX18Q96RF0 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SNX18Q96RF0 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SNX18Q96RF0 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNX18Q96RF0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SNX18Q96RF0 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.68■□□□□ 0.1
SNX18Q96RF0 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNX18Q96RF0 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX18Q96RF0 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SNX18Q96RF0 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX18Q96RF0 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX18Q96RF0 AC007950.2-201ENST00000615045 2347 ntBASIC15.67■□□□□ 0.1
SNX18Q96RF0 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SNX18Q96RF0 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX18Q96RF0 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX18Q96RF0 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX18Q96RF0 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX18Q96RF0 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SNX18Q96RF0 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX18Q96RF0 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.67■□□□□ 0.1
SNX18Q96RF0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.67■□□□□ 0.1
SNX18Q96RF0 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.67■□□□□ 0.1
SNX18Q96RF0 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.67■□□□□ 0.1
SNX18Q96RF0 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms