Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 ALOX12P2-203ENST00000570921 1945 ntBASIC14.78□□□□□ -0.04
CMTM3Q96MX0 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CMTM3Q96MX0 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CMTM3Q96MX0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CMTM3Q96MX0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CMTM3Q96MX0 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.77□□□□□ -0.04
CMTM3Q96MX0 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CMTM3Q96MX0 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.77□□□□□ -0.04
CMTM3Q96MX0 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CMTM3Q96MX0 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.77□□□□□ -0.04
CMTM3Q96MX0 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.77□□□□□ -0.04
CMTM3Q96MX0 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
CMTM3Q96MX0 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CMTM3Q96MX0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CMTM3Q96MX0 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CMTM3Q96MX0 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CMTM3Q96MX0 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CMTM3Q96MX0 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CMTM3Q96MX0 TSPY14P-201ENST00000303979 915 ntBASIC14.77□□□□□ -0.05
CMTM3Q96MX0 KRT18P48-201ENST00000434763 852 ntBASIC14.77□□□□□ -0.05
CMTM3Q96MX0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.77□□□□□ -0.05
CMTM3Q96MX0 FITM1-202ENST00000559294 800 ntBASIC14.77□□□□□ -0.05
CMTM3Q96MX0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.77□□□□□ -0.05
CMTM3Q96MX0 AC109462.3-201ENST00000573934 613 ntBASIC14.77□□□□□ -0.05
CMTM3Q96MX0 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.77□□□□□ -0.05
CMTM3Q96MX0 AC113410.3-201ENST00000623366 203 ntBASIC14.77□□□□□ -0.05
CMTM3Q96MX0 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.77□□□□□ -0.05
CMTM3Q96MX0 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CMTM3Q96MX0 LINC00554-201ENST00000564841 3011 ntBASIC14.77□□□□□ -0.05
CMTM3Q96MX0 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CMTM3Q96MX0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CMTM3Q96MX0 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.05
CMTM3Q96MX0 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.77□□□□□ -0.05
CMTM3Q96MX0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CMTM3Q96MX0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.77□□□□□ -0.05
CMTM3Q96MX0 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.77□□□□□ -0.05
CMTM3Q96MX0 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CMTM3Q96MX0 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
CMTM3Q96MX0 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CMTM3Q96MX0 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CMTM3Q96MX0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.77□□□□□ -0.05
CMTM3Q96MX0 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CMTM3Q96MX0 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.77□□□□□ -0.05
CMTM3Q96MX0 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CMTM3Q96MX0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CMTM3Q96MX0 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CMTM3Q96MX0 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMTM3Q96MX0 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CMTM3Q96MX0 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CMTM3Q96MX0 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CMTM3Q96MX0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMTM3Q96MX0 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMTM3Q96MX0 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMTM3Q96MX0 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMTM3Q96MX0 AC132872.4-202ENST00000622924 2756 ntBASIC14.76□□□□□ -0.05
CMTM3Q96MX0 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMTM3Q96MX0 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CMTM3Q96MX0 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMTM3Q96MX0 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMTM3Q96MX0 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMTM3Q96MX0 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMTM3Q96MX0 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMTM3Q96MX0 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMTM3Q96MX0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMTM3Q96MX0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms