Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LRCH3Q96II8 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH3Q96II8 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH3Q96II8 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
LRCH3Q96II8 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH3Q96II8 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.47■□□□□ 0.55
LRCH3Q96II8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH3Q96II8 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.47■□□□□ 0.55
LRCH3Q96II8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LRCH3Q96II8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH3Q96II8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH3Q96II8 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
LRCH3Q96II8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH3Q96II8 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH3Q96II8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH3Q96II8 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.47■□□□□ 0.55
LRCH3Q96II8 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH3Q96II8 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH3Q96II8 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH3Q96II8 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LRCH3Q96II8 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH3Q96II8 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.47■□□□□ 0.55
LRCH3Q96II8 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH3Q96II8 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.47■□□□□ 0.55
LRCH3Q96II8 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.47■□□□□ 0.55
LRCH3Q96II8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH3Q96II8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH3Q96II8 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.47■□□□□ 0.55
LRCH3Q96II8 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.47■□□□□ 0.55
LRCH3Q96II8 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.47■□□□□ 0.55
LRCH3Q96II8 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH3Q96II8 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.47■□□□□ 0.55
LRCH3Q96II8 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LRCH3Q96II8 WIZP1-201ENST00000531444 2299 ntBASIC18.47■□□□□ 0.55
LRCH3Q96II8 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH3Q96II8 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH3Q96II8 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH3Q96II8 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH3Q96II8 AL590787.1-201ENST00000568856 1315 ntBASIC18.47■□□□□ 0.55
LRCH3Q96II8 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LRCH3Q96II8 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRCH3Q96II8 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.46■□□□□ 0.55
LRCH3Q96II8 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.46■□□□□ 0.55
LRCH3Q96II8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRCH3Q96II8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRCH3Q96II8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRCH3Q96II8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRCH3Q96II8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LRCH3Q96II8 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.46■□□□□ 0.55
LRCH3Q96II8 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.46■□□□□ 0.55
LRCH3Q96II8 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.46■□□□□ 0.55
LRCH3Q96II8 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.46■□□□□ 0.55
LRCH3Q96II8 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC18.46■□□□□ 0.55
LRCH3Q96II8 CD74-212ENST00000524315 584 ntTSL 5 BASIC18.46■□□□□ 0.55
LRCH3Q96II8 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.46■□□□□ 0.55
LRCH3Q96II8 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.46■□□□□ 0.55
LRCH3Q96II8 AC008738.7-201ENST00000609744 511 ntBASIC18.46■□□□□ 0.55
LRCH3Q96II8 COX11-210ENST00000639671 696 ntBASIC18.46■□□□□ 0.55
LRCH3Q96II8 AL645728.2-201ENST00000641974 660 ntBASIC18.46■□□□□ 0.55
LRCH3Q96II8 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRCH3Q96II8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.46■□□□□ 0.55
LRCH3Q96II8 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
LRCH3Q96II8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRCH3Q96II8 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRCH3Q96II8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRCH3Q96II8 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.46■□□□□ 0.55
LRCH3Q96II8 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRCH3Q96II8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRCH3Q96II8 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRCH3Q96II8 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRCH3Q96II8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRCH3Q96II8 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.46■□□□□ 0.54
LRCH3Q96II8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.46■□□□□ 0.54
LRCH3Q96II8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.46■□□□□ 0.54
LRCH3Q96II8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
LRCH3Q96II8 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
LRCH3Q96II8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRCH3Q96II8 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.45■□□□□ 0.54
LRCH3Q96II8 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
LRCH3Q96II8 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRCH3Q96II8 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRCH3Q96II8 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRCH3Q96II8 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.45■□□□□ 0.54
LRCH3Q96II8 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.45■□□□□ 0.54
LRCH3Q96II8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRCH3Q96II8 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRCH3Q96II8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRCH3Q96II8 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.45■□□□□ 0.54
LRCH3Q96II8 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRCH3Q96II8 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRCH3Q96II8 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.45■□□□□ 0.54
LRCH3Q96II8 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
LRCH3Q96II8 KRT223P-202ENST00000449164 1292 ntBASIC18.45■□□□□ 0.54
LRCH3Q96II8 AC011495.1-201ENST00000498085 584 ntBASIC18.45■□□□□ 0.54
LRCH3Q96II8 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
LRCH3Q96II8 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC18.45■□□□□ 0.54
LRCH3Q96II8 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRCH3Q96II8 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC18.45■□□□□ 0.54
LRCH3Q96II8 IGHV3OR16-16-201ENST00000563644 343 ntBASIC18.45■□□□□ 0.54
LRCH3Q96II8 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms