Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CHD5Q8TDI0 AL645728.1-201ENST00000366221 2101 ntBASIC17.21■□□□□ 0.35
CHD5Q8TDI0 SNX33P1-201ENST00000592116 1762 ntBASIC17.21■□□□□ 0.35
CHD5Q8TDI0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHD5Q8TDI0 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CHD5Q8TDI0 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHD5Q8TDI0 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHD5Q8TDI0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.21■□□□□ 0.35
CHD5Q8TDI0 RNU1-129P-201ENST00000384064 167 ntBASIC17.21■□□□□ 0.35
CHD5Q8TDI0 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.21■□□□□ 0.35
CHD5Q8TDI0 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.21■□□□□ 0.35
CHD5Q8TDI0 U1.21-201ENST00000580816 167 ntBASIC17.21■□□□□ 0.35
CHD5Q8TDI0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.21■□□□□ 0.35
CHD5Q8TDI0 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHD5Q8TDI0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.21■□□□□ 0.35
CHD5Q8TDI0 AC013467.2-201ENST00000605472 835 ntBASIC17.21■□□□□ 0.35
CHD5Q8TDI0 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHD5Q8TDI0 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHD5Q8TDI0 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHD5Q8TDI0 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.21■□□□□ 0.35
CHD5Q8TDI0 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.21■□□□□ 0.35
CHD5Q8TDI0 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHD5Q8TDI0 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHD5Q8TDI0 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CHD5Q8TDI0 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHD5Q8TDI0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHD5Q8TDI0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHD5Q8TDI0 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHD5Q8TDI0 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHD5Q8TDI0 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CHD5Q8TDI0 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CHD5Q8TDI0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 HMGA1P7-201ENST00000406908 502 ntBASIC17.2■□□□□ 0.34
CHD5Q8TDI0 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.2■□□□□ 0.34
CHD5Q8TDI0 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHD5Q8TDI0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.19■□□□□ 0.34
CHD5Q8TDI0 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.19■□□□□ 0.34
CHD5Q8TDI0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHD5Q8TDI0 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHD5Q8TDI0 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.19■□□□□ 0.34
CHD5Q8TDI0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.19■□□□□ 0.34
CHD5Q8TDI0 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHD5Q8TDI0 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHD5Q8TDI0 RPSAP43-201ENST00000402237 625 ntBASIC17.19■□□□□ 0.34
CHD5Q8TDI0 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CHD5Q8TDI0 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.19■□□□□ 0.34
CHD5Q8TDI0 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.19■□□□□ 0.34
CHD5Q8TDI0 MIR4515-201ENST00000584082 81 ntBASIC17.19■□□□□ 0.34
CHD5Q8TDI0 CYP2A7P1-201ENST00000595391 815 ntBASIC17.19■□□□□ 0.34
CHD5Q8TDI0 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CHD5Q8TDI0 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHD5Q8TDI0 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHD5Q8TDI0 AC078925.2-201ENST00000624013 1973 ntBASIC17.19■□□□□ 0.34
CHD5Q8TDI0 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHD5Q8TDI0 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
CHD5Q8TDI0 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHD5Q8TDI0 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHD5Q8TDI0 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHD5Q8TDI0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHD5Q8TDI0 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHD5Q8TDI0 AL603756.1-201ENST00000606511 2163 ntBASIC17.19■□□□□ 0.34
CHD5Q8TDI0 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHD5Q8TDI0 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.19■□□□□ 0.34
CHD5Q8TDI0 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHD5Q8TDI0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms