Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
NANOGP1Q8N7R0 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NANOGP1Q8N7R0 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NANOGP1Q8N7R0 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
NANOGP1Q8N7R0 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NANOGP1Q8N7R0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NANOGP1Q8N7R0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NANOGP1Q8N7R0 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
NANOGP1Q8N7R0 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NANOGP1Q8N7R0 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NANOGP1Q8N7R0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NANOGP1Q8N7R0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NANOGP1Q8N7R0 AC006538.1-201ENST00000567905 1585 ntBASIC15.32■□□□□ 0.04
NANOGP1Q8N7R0 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
NANOGP1Q8N7R0 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.32■□□□□ 0.04
NANOGP1Q8N7R0 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NANOGP1Q8N7R0 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NANOGP1Q8N7R0 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NANOGP1Q8N7R0 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.32■□□□□ 0.04
NANOGP1Q8N7R0 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 ME2P1-201ENST00000426028 1970 ntBASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 HMGA1P5-201ENST00000412453 271 ntBASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 GCSHP2-201ENST00000560971 527 ntBASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 GPR89P-201ENST00000407924 1495 ntBASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NANOGP1Q8N7R0 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NANOGP1Q8N7R0 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NANOGP1Q8N7R0 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NANOGP1Q8N7R0 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NANOGP1Q8N7R0 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NANOGP1Q8N7R0 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.3■□□□□ 0.04
NANOGP1Q8N7R0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NANOGP1Q8N7R0 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NANOGP1Q8N7R0 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.3■□□□□ 0.04
NANOGP1Q8N7R0 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
NANOGP1Q8N7R0 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NANOGP1Q8N7R0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NANOGP1Q8N7R0 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NANOGP1Q8N7R0 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NANOGP1Q8N7R0 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NANOGP1Q8N7R0 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NANOGP1Q8N7R0 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NANOGP1Q8N7R0 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NANOGP1Q8N7R0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NANOGP1Q8N7R0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.3■□□□□ 0.04
NANOGP1Q8N7R0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.3■□□□□ 0.04
NANOGP1Q8N7R0 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NANOGP1Q8N7R0 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NANOGP1Q8N7R0 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.3■□□□□ 0.04
NANOGP1Q8N7R0 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms