Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
KRT78Q8N1N4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
KRT78Q8N1N4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
KRT78Q8N1N4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.58■□□□□ 0.25
KRT78Q8N1N4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.58■□□□□ 0.25
KRT78Q8N1N4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
KRT78Q8N1N4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
KRT78Q8N1N4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
KRT78Q8N1N4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
KRT78Q8N1N4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
KRT78Q8N1N4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
KRT78Q8N1N4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
KRT78Q8N1N4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
KRT78Q8N1N4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT78Q8N1N4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KRT78Q8N1N4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KRT78Q8N1N4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KRT78Q8N1N4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT78Q8N1N4 LINC00982-205ENST00000420957 435 ntBASIC16.58■□□□□ 0.24
KRT78Q8N1N4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.58■□□□□ 0.24
KRT78Q8N1N4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
KRT78Q8N1N4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.58■□□□□ 0.24
KRT78Q8N1N4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.58■□□□□ 0.24
KRT78Q8N1N4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.58■□□□□ 0.24
KRT78Q8N1N4 NKAPP1-205ENST00000585790 367 ntBASIC16.58■□□□□ 0.24
KRT78Q8N1N4 IFNL4P1-201ENST00000607083 540 ntBASIC16.58■□□□□ 0.24
KRT78Q8N1N4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
KRT78Q8N1N4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
KRT78Q8N1N4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT78Q8N1N4 GPR89P-201ENST00000407924 1495 ntBASIC16.58■□□□□ 0.24
KRT78Q8N1N4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.58■□□□□ 0.24
KRT78Q8N1N4 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT78Q8N1N4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT78Q8N1N4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT78Q8N1N4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.58■□□□□ 0.24
KRT78Q8N1N4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT78Q8N1N4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
KRT78Q8N1N4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT78Q8N1N4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
KRT78Q8N1N4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KRT78Q8N1N4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.24
KRT78Q8N1N4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT78Q8N1N4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KRT78Q8N1N4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.58■□□□□ 0.24
KRT78Q8N1N4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KRT78Q8N1N4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT78Q8N1N4 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KRT78Q8N1N4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
KRT78Q8N1N4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KRT78Q8N1N4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KRT78Q8N1N4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KRT78Q8N1N4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.57■□□□□ 0.24
KRT78Q8N1N4 AL121761.2-201ENST00000598007 1648 ntBASIC16.57■□□□□ 0.24
KRT78Q8N1N4 NCF1C-201ENST00000438382 1427 ntBASIC16.57■□□□□ 0.24
KRT78Q8N1N4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KRT78Q8N1N4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KRT78Q8N1N4 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.57■□□□□ 0.24
KRT78Q8N1N4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KRT78Q8N1N4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KRT78Q8N1N4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KRT78Q8N1N4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
KRT78Q8N1N4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
KRT78Q8N1N4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.57■□□□□ 0.24
KRT78Q8N1N4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
KRT78Q8N1N4 AC124947.2-201ENST00000547118 1133 ntBASIC16.57■□□□□ 0.24
KRT78Q8N1N4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
KRT78Q8N1N4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.57■□□□□ 0.24
KRT78Q8N1N4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.57■□□□□ 0.24
KRT78Q8N1N4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.57■□□□□ 0.24
KRT78Q8N1N4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
KRT78Q8N1N4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
KRT78Q8N1N4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.57■□□□□ 0.24
KRT78Q8N1N4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KRT78Q8N1N4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KRT78Q8N1N4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
KRT78Q8N1N4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.57■□□□□ 0.24
KRT78Q8N1N4 AC004817.3-201ENST00000602957 2129 ntBASIC16.57■□□□□ 0.24
KRT78Q8N1N4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KRT78Q8N1N4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.57■□□□□ 0.24
KRT78Q8N1N4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KRT78Q8N1N4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
KRT78Q8N1N4 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KRT78Q8N1N4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
KRT78Q8N1N4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT78Q8N1N4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT78Q8N1N4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.56■□□□□ 0.24
KRT78Q8N1N4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
KRT78Q8N1N4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT78Q8N1N4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.56■□□□□ 0.24
KRT78Q8N1N4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT78Q8N1N4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT78Q8N1N4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
KRT78Q8N1N4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT78Q8N1N4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
KRT78Q8N1N4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms