Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 FLJ38576-201ENST00000623820 2459 ntBASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 NUS1P2-201ENST00000417358 873 ntBASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 AC114341.1-201ENST00000618070 349 ntBASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00346Q8IVM7 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
LINC00346Q8IVM7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00346Q8IVM7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00346Q8IVM7 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00346Q8IVM7 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00346Q8IVM7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LINC00346Q8IVM7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00346Q8IVM7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LINC00346Q8IVM7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.21■□□□□ 0.03
LINC00346Q8IVM7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00346Q8IVM7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00346Q8IVM7 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
LINC00346Q8IVM7 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.21■□□□□ 0.03
LINC00346Q8IVM7 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00346Q8IVM7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.21■□□□□ 0.03
LINC00346Q8IVM7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.21■□□□□ 0.03
LINC00346Q8IVM7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.21■□□□□ 0.03
LINC00346Q8IVM7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.21■□□□□ 0.03
LINC00346Q8IVM7 AC091076.1-201ENST00000610741 619 ntBASIC15.21■□□□□ 0.03
LINC00346Q8IVM7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.21■□□□□ 0.03
LINC00346Q8IVM7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00346Q8IVM7 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00346Q8IVM7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LINC00346Q8IVM7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00346Q8IVM7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.21■□□□□ 0.03
LINC00346Q8IVM7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00346Q8IVM7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00346Q8IVM7 FER1L4-210ENST00000615531 5998 ntBASIC15.21■□□□□ 0.03
LINC00346Q8IVM7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.21■□□□□ 0.03
LINC00346Q8IVM7 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00346Q8IVM7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LINC00346Q8IVM7 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LINC00346Q8IVM7 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
LINC00346Q8IVM7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
LINC00346Q8IVM7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LINC00346Q8IVM7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
LINC00346Q8IVM7 AC148477.5-201ENST00000625164 1645 ntBASIC15.21■□□□□ 0.02
LINC00346Q8IVM7 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LINC00346Q8IVM7 RNF216P1-203ENST00000404404 2427 ntBASIC15.21■□□□□ 0.02
LINC00346Q8IVM7 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00346Q8IVM7 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms