Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.08■□□□□ 0.65
TRIM50Q86XT4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM50Q86XT4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM50Q86XT4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM50Q86XT4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.08■□□□□ 0.64
TRIM50Q86XT4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.08■□□□□ 0.64
TRIM50Q86XT4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM50Q86XT4 AP002472.1-201ENST00000577490 586 ntBASIC19.08■□□□□ 0.64
TRIM50Q86XT4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.08■□□□□ 0.64
TRIM50Q86XT4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
TRIM50Q86XT4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TRIM50Q86XT4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM50Q86XT4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.08■□□□□ 0.64
TRIM50Q86XT4 AL355385.1-201ENST00000606123 409 ntBASIC19.08■□□□□ 0.64
TRIM50Q86XT4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.08■□□□□ 0.64
TRIM50Q86XT4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
TRIM50Q86XT4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM50Q86XT4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM50Q86XT4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.08■□□□□ 0.64
TRIM50Q86XT4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM50Q86XT4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM50Q86XT4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM50Q86XT4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM50Q86XT4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.07■□□□□ 0.64
TRIM50Q86XT4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM50Q86XT4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM50Q86XT4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TRIM50Q86XT4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM50Q86XT4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM50Q86XT4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM50Q86XT4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM50Q86XT4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.07■□□□□ 0.64
TRIM50Q86XT4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM50Q86XT4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM50Q86XT4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM50Q86XT4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM50Q86XT4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM50Q86XT4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM50Q86XT4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.07■□□□□ 0.64
TRIM50Q86XT4 HMGN1P19-201ENST00000436976 333 ntBASIC19.07■□□□□ 0.64
TRIM50Q86XT4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TRIM50Q86XT4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM50Q86XT4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.07■□□□□ 0.64
TRIM50Q86XT4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.07■□□□□ 0.64
TRIM50Q86XT4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.07■□□□□ 0.64
TRIM50Q86XT4 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.07■□□□□ 0.64
TRIM50Q86XT4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM50Q86XT4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM50Q86XT4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM50Q86XT4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM50Q86XT4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM50Q86XT4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM50Q86XT4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
TRIM50Q86XT4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM50Q86XT4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM50Q86XT4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TRIM50Q86XT4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM50Q86XT4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM50Q86XT4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM50Q86XT4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM50Q86XT4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM50Q86XT4 AC129492.6-201ENST00000611383 1305 ntBASIC19.06■□□□□ 0.64
TRIM50Q86XT4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM50Q86XT4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM50Q86XT4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM50Q86XT4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM50Q86XT4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.06■□□□□ 0.64
TRIM50Q86XT4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.06■□□□□ 0.64
TRIM50Q86XT4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM50Q86XT4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.06■□□□□ 0.64
TRIM50Q86XT4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM50Q86XT4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM50Q86XT4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM50Q86XT4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM50Q86XT4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TRIM50Q86XT4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.06■□□□□ 0.64
TRIM50Q86XT4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.06■□□□□ 0.64
TRIM50Q86XT4 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TRIM50Q86XT4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.06■□□□□ 0.64
TRIM50Q86XT4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM50Q86XT4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM50Q86XT4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
TRIM50Q86XT4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM50Q86XT4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM50Q86XT4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
TRIM50Q86XT4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.06■□□□□ 0.64
TRIM50Q86XT4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM50Q86XT4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
TRIM50Q86XT4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TRIM50Q86XT4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM50Q86XT4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TRIM50Q86XT4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM50Q86XT4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM50Q86XT4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM50Q86XT4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM50Q86XT4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM50Q86XT4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM50Q86XT4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM50Q86XT4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM50Q86XT4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms