Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.61■□□□□ 0.25
HIST2H2AA3Q6FI13 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIST2H2AA3Q6FI13 AC106795.1-205ENST00000512851 1056 ntBASIC16.61■□□□□ 0.25
HIST2H2AA3Q6FI13 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.61■□□□□ 0.25
HIST2H2AA3Q6FI13 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.61■□□□□ 0.25
HIST2H2AA3Q6FI13 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.61■□□□□ 0.25
HIST2H2AA3Q6FI13 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.61■□□□□ 0.25
HIST2H2AA3Q6FI13 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.61■□□□□ 0.25
HIST2H2AA3Q6FI13 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIST2H2AA3Q6FI13 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST2H2AA3Q6FI13 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.61■□□□□ 0.25
HIST2H2AA3Q6FI13 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.61■□□□□ 0.25
HIST2H2AA3Q6FI13 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST2H2AA3Q6FI13 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST2H2AA3Q6FI13 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
HIST2H2AA3Q6FI13 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HIST2H2AA3Q6FI13 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST2H2AA3Q6FI13 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST2H2AA3Q6FI13 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST2H2AA3Q6FI13 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.61■□□□□ 0.25
HIST2H2AA3Q6FI13 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.61■□□□□ 0.25
HIST2H2AA3Q6FI13 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.61■□□□□ 0.25
HIST2H2AA3Q6FI13 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIST2H2AA3Q6FI13 GPR89P-201ENST00000407924 1495 ntBASIC16.61■□□□□ 0.25
HIST2H2AA3Q6FI13 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIST2H2AA3Q6FI13 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST2H2AA3Q6FI13 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 SLC25A1P3-201ENST00000395415 828 ntBASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 PRYP5-201ENST00000451909 266 ntBASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 MTDHP3-201ENST00000594186 672 ntBASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H2AA3Q6FI13 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
HIST2H2AA3Q6FI13 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.59■□□□□ 0.25
HIST2H2AA3Q6FI13 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST2H2AA3Q6FI13 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST2H2AA3Q6FI13 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST2H2AA3Q6FI13 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST2H2AA3Q6FI13 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIST2H2AA3Q6FI13 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.59■□□□□ 0.25
HIST2H2AA3Q6FI13 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST2H2AA3Q6FI13 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
HIST2H2AA3Q6FI13 AC124947.2-201ENST00000547118 1133 ntBASIC16.59■□□□□ 0.25
HIST2H2AA3Q6FI13 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.59■□□□□ 0.25
HIST2H2AA3Q6FI13 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.59■□□□□ 0.25
HIST2H2AA3Q6FI13 AL139288.1-201ENST00000623748 933 ntBASIC16.59■□□□□ 0.25
HIST2H2AA3Q6FI13 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIST2H2AA3Q6FI13 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIST2H2AA3Q6FI13 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIST2H2AA3Q6FI13 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST2H2AA3Q6FI13 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST2H2AA3Q6FI13 AC080080.1-201ENST00000625121 2420 ntBASIC16.59■□□□□ 0.25
HIST2H2AA3Q6FI13 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.59■□□□□ 0.25
HIST2H2AA3Q6FI13 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIST2H2AA3Q6FI13 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIST2H2AA3Q6FI13 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIST2H2AA3Q6FI13 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.59■□□□□ 0.25
HIST2H2AA3Q6FI13 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST2H2AA3Q6FI13 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIST2H2AA3Q6FI13 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.59■□□□□ 0.25
HIST2H2AA3Q6FI13 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST2H2AA3Q6FI13 AL356309.3-201ENST00000624132 1934 ntBASIC16.58■□□□□ 0.25
HIST2H2AA3Q6FI13 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HIST2H2AA3Q6FI13 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIST2H2AA3Q6FI13 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.58■□□□□ 0.25
HIST2H2AA3Q6FI13 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms