Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.34■□□□□ 0.37
CDH17Q12864 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.34■□□□□ 0.37
CDH17Q12864 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.34■□□□□ 0.37
CDH17Q12864 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
CDH17Q12864 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.34■□□□□ 0.37
CDH17Q12864 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH17Q12864 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.34■□□□□ 0.37
CDH17Q12864 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.34■□□□□ 0.37
CDH17Q12864 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH17Q12864 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.34■□□□□ 0.37
CDH17Q12864 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH17Q12864 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH17Q12864 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH17Q12864 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH17Q12864 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.34■□□□□ 0.37
CDH17Q12864 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CDH17Q12864 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
CDH17Q12864 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CDH17Q12864 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH17Q12864 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDH17Q12864 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDH17Q12864 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDH17Q12864 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.33■□□□□ 0.37
CDH17Q12864 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CDH17Q12864 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.33■□□□□ 0.37
CDH17Q12864 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDH17Q12864 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDH17Q12864 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDH17Q12864 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CDH17Q12864 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH17Q12864 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH17Q12864 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH17Q12864 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH17Q12864 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.33■□□□□ 0.36
CDH17Q12864 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.33■□□□□ 0.36
CDH17Q12864 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.33■□□□□ 0.36
CDH17Q12864 AL732292.2-201ENST00000609649 430 ntBASIC17.33■□□□□ 0.36
CDH17Q12864 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.33■□□□□ 0.36
CDH17Q12864 AL139288.1-201ENST00000623748 933 ntBASIC17.33■□□□□ 0.36
CDH17Q12864 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH17Q12864 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
CDH17Q12864 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH17Q12864 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH17Q12864 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CDH17Q12864 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH17Q12864 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH17Q12864 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CDH17Q12864 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.33■□□□□ 0.36
CDH17Q12864 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH17Q12864 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.33■□□□□ 0.36
CDH17Q12864 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.32■□□□□ 0.36
CDH17Q12864 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH17Q12864 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH17Q12864 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH17Q12864 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH17Q12864 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.32■□□□□ 0.36
CDH17Q12864 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH17Q12864 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH17Q12864 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
CDH17Q12864 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
CDH17Q12864 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH17Q12864 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH17Q12864 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.32■□□□□ 0.36
CDH17Q12864 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH17Q12864 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH17Q12864 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CDH17Q12864 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CDH17Q12864 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.32■□□□□ 0.36
CDH17Q12864 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.32■□□□□ 0.36
CDH17Q12864 BX005266.1-201ENST00000473402 457 ntBASIC17.32■□□□□ 0.36
CDH17Q12864 KRT18P31-201ENST00000506277 1292 ntBASIC17.32■□□□□ 0.36
CDH17Q12864 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CDH17Q12864 AL022326.1-202ENST00000641533 845 ntBASIC17.32■□□□□ 0.36
CDH17Q12864 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH17Q12864 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH17Q12864 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH17Q12864 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH17Q12864 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.32■□□□□ 0.36
CDH17Q12864 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH17Q12864 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH17Q12864 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CDH17Q12864 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CDH17Q12864 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CDH17Q12864 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH17Q12864 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH17Q12864 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH17Q12864 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH17Q12864 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH17Q12864 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CDH17Q12864 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH17Q12864 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH17Q12864 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CDH17Q12864 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH17Q12864 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH17Q12864 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH17Q12864 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH17Q12864 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.31■□□□□ 0.36
CDH17Q12864 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.31■□□□□ 0.36
CDH17Q12864 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.31■□□□□ 0.36
CDH17Q12864 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms