Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
WNT3AP56704 RN7SL510P-201ENST00000581311 263 ntBASIC17.34■□□□□ 0.37
WNT3AP56704 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.34■□□□□ 0.37
WNT3AP56704 AL121912.1-201ENST00000603683 238 ntBASIC17.34■□□□□ 0.37
WNT3AP56704 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
WNT3AP56704 AL691432.3-201ENST00000621860 400 ntBASIC17.34■□□□□ 0.37
WNT3AP56704 TP73-AS1-207ENST00000624167 988 ntBASIC17.34■□□□□ 0.37
WNT3AP56704 AC005915.1-201ENST00000624912 2018 ntBASIC17.34■□□□□ 0.37
WNT3AP56704 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.34■□□□□ 0.37
WNT3AP56704 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
WNT3AP56704 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.34■□□□□ 0.37
WNT3AP56704 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
WNT3AP56704 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
WNT3AP56704 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
WNT3AP56704 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
WNT3AP56704 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
WNT3AP56704 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
WNT3AP56704 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
WNT3AP56704 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.33■□□□□ 0.37
WNT3AP56704 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.33■□□□□ 0.37
WNT3AP56704 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
WNT3AP56704 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.33■□□□□ 0.37
WNT3AP56704 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
WNT3AP56704 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.33■□□□□ 0.36
WNT3AP56704 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
WNT3AP56704 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
WNT3AP56704 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
WNT3AP56704 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.33■□□□□ 0.36
WNT3AP56704 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.33■□□□□ 0.36
WNT3AP56704 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.33■□□□□ 0.36
WNT3AP56704 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.33■□□□□ 0.36
WNT3AP56704 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.33■□□□□ 0.36
WNT3AP56704 KRT126P-201ENST00000549467 1181 ntBASIC17.33■□□□□ 0.36
WNT3AP56704 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.33■□□□□ 0.36
WNT3AP56704 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.33■□□□□ 0.36
WNT3AP56704 AC004706.3-202ENST00000621574 984 ntBASIC17.33■□□□□ 0.36
WNT3AP56704 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.33■□□□□ 0.36
WNT3AP56704 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
WNT3AP56704 AC105020.1-201ENST00000435356 2205 ntBASIC17.33■□□□□ 0.36
WNT3AP56704 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.33■□□□□ 0.36
WNT3AP56704 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
WNT3AP56704 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
WNT3AP56704 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
WNT3AP56704 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
WNT3AP56704 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
WNT3AP56704 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
WNT3AP56704 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
WNT3AP56704 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.32■□□□□ 0.36
WNT3AP56704 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
WNT3AP56704 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.32■□□□□ 0.36
WNT3AP56704 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
WNT3AP56704 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.32■□□□□ 0.36
WNT3AP56704 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.32■□□□□ 0.36
WNT3AP56704 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
WNT3AP56704 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
WNT3AP56704 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
WNT3AP56704 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
WNT3AP56704 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.32■□□□□ 0.36
WNT3AP56704 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.32■□□□□ 0.36
WNT3AP56704 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.32■□□□□ 0.36
WNT3AP56704 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.32■□□□□ 0.36
WNT3AP56704 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.32■□□□□ 0.36
WNT3AP56704 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
WNT3AP56704 RNPS1P1-201ENST00000507437 918 ntBASIC17.32■□□□□ 0.36
WNT3AP56704 AC073648.2-201ENST00000510116 352 ntBASIC17.32■□□□□ 0.36
WNT3AP56704 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
WNT3AP56704 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.32■□□□□ 0.36
WNT3AP56704 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.32■□□□□ 0.36
WNT3AP56704 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.32■□□□□ 0.36
WNT3AP56704 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
WNT3AP56704 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
WNT3AP56704 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
WNT3AP56704 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
WNT3AP56704 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
WNT3AP56704 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
WNT3AP56704 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
WNT3AP56704 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
WNT3AP56704 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
WNT3AP56704 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
WNT3AP56704 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
WNT3AP56704 AC106886.4-201ENST00000623557 2502 ntBASIC17.31■□□□□ 0.36
WNT3AP56704 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
WNT3AP56704 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
WNT3AP56704 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
WNT3AP56704 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.31■□□□□ 0.36
WNT3AP56704 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
WNT3AP56704 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
WNT3AP56704 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.31■□□□□ 0.36
WNT3AP56704 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
WNT3AP56704 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
WNT3AP56704 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
WNT3AP56704 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
WNT3AP56704 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
WNT3AP56704 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
WNT3AP56704 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.31■□□□□ 0.36
WNT3AP56704 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
WNT3AP56704 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
WNT3AP56704 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
WNT3AP56704 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
WNT3AP56704 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms