Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
CTNNA1P35221 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTNNA1P35221 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CTNNA1P35221 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTNNA1P35221 AC011270.2-201ENST00000624293 2550 ntBASIC18.17■□□□□ 0.5
CTNNA1P35221 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTNNA1P35221 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.17■□□□□ 0.5
CTNNA1P35221 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTNNA1P35221 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTNNA1P35221 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTNNA1P35221 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CTNNA1P35221 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTNNA1P35221 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CTNNA1P35221 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
CTNNA1P35221 LINC02199-201ENST00000506655 2702 ntBASIC18.16■□□□□ 0.5
CTNNA1P35221 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CTNNA1P35221 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTNNA1P35221 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTNNA1P35221 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTNNA1P35221 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTNNA1P35221 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.16■□□□□ 0.5
CTNNA1P35221 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTNNA1P35221 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.16■□□□□ 0.5
CTNNA1P35221 AC246785.2-201ENST00000432512 513 ntBASIC18.16■□□□□ 0.5
CTNNA1P35221 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTNNA1P35221 KRT8P26-201ENST00000534154 1276 ntBASIC18.16■□□□□ 0.5
CTNNA1P35221 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTNNA1P35221 RN7SL850P-201ENST00000579959 291 ntBASIC18.16■□□□□ 0.5
CTNNA1P35221 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTNNA1P35221 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.16■□□□□ 0.5
CTNNA1P35221 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.16■□□□□ 0.5
CTNNA1P35221 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTNNA1P35221 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CTNNA1P35221 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTNNA1P35221 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.16■□□□□ 0.5
CTNNA1P35221 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CTNNA1P35221 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTNNA1P35221 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTNNA1P35221 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.16■□□□□ 0.5
CTNNA1P35221 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTNNA1P35221 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CTNNA1P35221 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CTNNA1P35221 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.15■□□□□ 0.5
CTNNA1P35221 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTNNA1P35221 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTNNA1P35221 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTNNA1P35221 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTNNA1P35221 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CTNNA1P35221 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CTNNA1P35221 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CTNNA1P35221 AC092068.3-201ENST00000587894 2016 ntBASIC18.15■□□□□ 0.5
CTNNA1P35221 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CTNNA1P35221 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTNNA1P35221 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.15■□□□□ 0.5
CTNNA1P35221 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CTNNA1P35221 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTNNA1P35221 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.15■□□□□ 0.5
CTNNA1P35221 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CTNNA1P35221 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.15■□□□□ 0.5
CTNNA1P35221 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTNNA1P35221 RCN1P1-201ENST00000400413 996 ntBASIC18.15■□□□□ 0.5
CTNNA1P35221 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.15■□□□□ 0.5
CTNNA1P35221 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.15■□□□□ 0.5
CTNNA1P35221 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.15■□□□□ 0.5
CTNNA1P35221 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.15■□□□□ 0.5
CTNNA1P35221 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.15■□□□□ 0.5
CTNNA1P35221 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CTNNA1P35221 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CTNNA1P35221 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTNNA1P35221 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTNNA1P35221 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTNNA1P35221 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTNNA1P35221 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTNNA1P35221 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.15■□□□□ 0.5
CTNNA1P35221 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CTNNA1P35221 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTNNA1P35221 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTNNA1P35221 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTNNA1P35221 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTNNA1P35221 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTNNA1P35221 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CTNNA1P35221 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.5
CTNNA1P35221 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CTNNA1P35221 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CTNNA1P35221 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.14■□□□□ 0.5
CTNNA1P35221 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.14■□□□□ 0.5
CTNNA1P35221 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.14■□□□□ 0.49
CTNNA1P35221 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CTNNA1P35221 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.14■□□□□ 0.49
CTNNA1P35221 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTNNA1P35221 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.14■□□□□ 0.49
CTNNA1P35221 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.14■□□□□ 0.49
CTNNA1P35221 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.14■□□□□ 0.49
CTNNA1P35221 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CTNNA1P35221 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTNNA1P35221 AC078925.2-201ENST00000624013 1973 ntBASIC18.14■□□□□ 0.49
CTNNA1P35221 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTNNA1P35221 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTNNA1P35221 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.14■□□□□ 0.49
CTNNA1P35221 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms