Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHRNB1P11230 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CHRNB1P11230 REXO1L11P-201ENST00000620964 1927 ntBASIC17.33■□□□□ 0.37
CHRNB1P11230 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.33■□□□□ 0.37
CHRNB1P11230 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHRNB1P11230 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHRNB1P11230 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.33■□□□□ 0.37
CHRNB1P11230 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.33■□□□□ 0.37
CHRNB1P11230 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CHRNB1P11230 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.33■□□□□ 0.36
CHRNB1P11230 AC139713.2-201ENST00000641328 2723 ntBASIC17.33■□□□□ 0.36
CHRNB1P11230 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNB1P11230 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CHRNB1P11230 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNB1P11230 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.33■□□□□ 0.36
CHRNB1P11230 AC107890.1-201ENST00000422478 521 ntBASIC17.33■□□□□ 0.36
CHRNB1P11230 SPCS2P4-201ENST00000436160 681 ntBASIC17.33■□□□□ 0.36
CHRNB1P11230 RBPMS2P1-201ENST00000437762 623 ntBASIC17.33■□□□□ 0.36
CHRNB1P11230 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.33■□□□□ 0.36
CHRNB1P11230 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.33■□□□□ 0.36
CHRNB1P11230 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.33■□□□□ 0.36
CHRNB1P11230 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.33■□□□□ 0.36
CHRNB1P11230 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.33■□□□□ 0.36
CHRNB1P11230 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.33■□□□□ 0.36
CHRNB1P11230 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.33■□□□□ 0.36
CHRNB1P11230 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.33■□□□□ 0.36
CHRNB1P11230 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNB1P11230 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.33■□□□□ 0.36
CHRNB1P11230 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNB1P11230 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.33■□□□□ 0.36
CHRNB1P11230 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNB1P11230 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CHRNB1P11230 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNB1P11230 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.33■□□□□ 0.36
CHRNB1P11230 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNB1P11230 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CHRNB1P11230 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.33■□□□□ 0.36
CHRNB1P11230 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.33■□□□□ 0.36
CHRNB1P11230 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.33■□□□□ 0.36
CHRNB1P11230 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNB1P11230 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CHRNB1P11230 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNB1P11230 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
CHRNB1P11230 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNB1P11230 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CHRNB1P11230 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNB1P11230 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
CHRNB1P11230 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNB1P11230 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CHRNB1P11230 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNB1P11230 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNB1P11230 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CHRNB1P11230 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNB1P11230 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CHRNB1P11230 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNB1P11230 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.32■□□□□ 0.36
CHRNB1P11230 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.32■□□□□ 0.36
CHRNB1P11230 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.32■□□□□ 0.36
CHRNB1P11230 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.32■□□□□ 0.36
CHRNB1P11230 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.32■□□□□ 0.36
CHRNB1P11230 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.32■□□□□ 0.36
CHRNB1P11230 UGT1A2P-201ENST00000454886 866 ntBASIC17.32■□□□□ 0.36
CHRNB1P11230 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CHRNB1P11230 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.32■□□□□ 0.36
CHRNB1P11230 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.32■□□□□ 0.36
CHRNB1P11230 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.32■□□□□ 0.36
CHRNB1P11230 LINC01225-203ENST00000563550 1244 ntBASIC17.32■□□□□ 0.36
CHRNB1P11230 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.32■□□□□ 0.36
CHRNB1P11230 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNB1P11230 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CHRNB1P11230 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CHRNB1P11230 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNB1P11230 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNB1P11230 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNB1P11230 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.32■□□□□ 0.36
CHRNB1P11230 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.32■□□□□ 0.36
CHRNB1P11230 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNB1P11230 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNB1P11230 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNB1P11230 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.32■□□□□ 0.36
CHRNB1P11230 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.32■□□□□ 0.36
CHRNB1P11230 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNB1P11230 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.32■□□□□ 0.36
CHRNB1P11230 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNB1P11230 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNB1P11230 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNB1P11230 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNB1P11230 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.31■□□□□ 0.36
CHRNB1P11230 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNB1P11230 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNB1P11230 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNB1P11230 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.31■□□□□ 0.36
CHRNB1P11230 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.31■□□□□ 0.36
CHRNB1P11230 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNB1P11230 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNB1P11230 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNB1P11230 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.31■□□□□ 0.36
CHRNB1P11230 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNB1P11230 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CHRNB1P11230 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms