Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
HOXC6P09630 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.28■□□□□ 0.68
HOXC6P09630 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC6P09630 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC6P09630 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC6P09630 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.28■□□□□ 0.68
HOXC6P09630 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC6P09630 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
HOXC6P09630 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC6P09630 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.27■□□□□ 0.68
HOXC6P09630 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC6P09630 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC6P09630 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
HOXC6P09630 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC6P09630 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC6P09630 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC6P09630 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
HOXC6P09630 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC6P09630 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.27■□□□□ 0.68
HOXC6P09630 TREML5P-201ENST00000421694 576 ntBASIC19.27■□□□□ 0.68
HOXC6P09630 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.27■□□□□ 0.68
HOXC6P09630 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC6P09630 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
HOXC6P09630 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.27■□□□□ 0.68
HOXC6P09630 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.27■□□□□ 0.68
HOXC6P09630 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC6P09630 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
HOXC6P09630 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC6P09630 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.27■□□□□ 0.68
HOXC6P09630 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.27■□□□□ 0.68
HOXC6P09630 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
HOXC6P09630 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC6P09630 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
HOXC6P09630 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC6P09630 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
HOXC6P09630 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HOXC6P09630 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
HOXC6P09630 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
HOXC6P09630 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.26■□□□□ 0.67
HOXC6P09630 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC6P09630 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC6P09630 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC6P09630 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC6P09630 UXT-AS1-201ENST00000590504 1525 ntBASIC19.26■□□□□ 0.67
HOXC6P09630 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC6P09630 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.26■□□□□ 0.67
HOXC6P09630 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HOXC6P09630 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC6P09630 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
HOXC6P09630 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC6P09630 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC6P09630 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC6P09630 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.26■□□□□ 0.67
HOXC6P09630 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC6P09630 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.26■□□□□ 0.67
HOXC6P09630 SLC25A39P2-201ENST00000537614 270 ntBASIC19.26■□□□□ 0.67
HOXC6P09630 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.26■□□□□ 0.67
HOXC6P09630 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC6P09630 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
HOXC6P09630 AC008761.3-201ENST00000624803 892 ntBASIC19.26■□□□□ 0.67
HOXC6P09630 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC6P09630 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC6P09630 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC6P09630 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
HOXC6P09630 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HOXC6P09630 LINC00304-203ENST00000565008 1864 ntBASIC19.26■□□□□ 0.67
HOXC6P09630 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC6P09630 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC6P09630 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC6P09630 WASH6P-202ENST00000359512 1437 ntBASIC19.25■□□□□ 0.67
HOXC6P09630 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HOXC6P09630 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXC6P09630 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
HOXC6P09630 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC6P09630 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC6P09630 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC6P09630 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC6P09630 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HOXC6P09630 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC6P09630 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC6P09630 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC6P09630 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC6P09630 AL353732.1-201ENST00000569618 1459 ntBASIC19.25■□□□□ 0.67
HOXC6P09630 MIR346-201ENST00000362234 95 ntBASIC19.25■□□□□ 0.67
HOXC6P09630 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC6P09630 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
HOXC6P09630 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.25■□□□□ 0.67
HOXC6P09630 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.25■□□□□ 0.67
HOXC6P09630 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXC6P09630 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXC6P09630 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXC6P09630 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
HOXC6P09630 LINC02560-201ENST00000596379 459 ntBASIC19.25■□□□□ 0.67
HOXC6P09630 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.25■□□□□ 0.67
HOXC6P09630 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
HOXC6P09630 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC6P09630 BCL2-203ENST00000589955 5011 ntBASIC19.25■□□□□ 0.67
HOXC6P09630 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.25■□□□□ 0.67
HOXC6P09630 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HOXC6P09630 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms