Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
POLR3DP05423 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
POLR3DP05423 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
POLR3DP05423 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
POLR3DP05423 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC20.51■□□□□ 0.87
POLR3DP05423 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
POLR3DP05423 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
POLR3DP05423 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.51■□□□□ 0.87
POLR3DP05423 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.51■□□□□ 0.87
POLR3DP05423 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
POLR3DP05423 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.51■□□□□ 0.87
POLR3DP05423 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
POLR3DP05423 AC002347.1-201ENST00000569543 541 ntBASIC20.51■□□□□ 0.87
POLR3DP05423 AC010654.1-201ENST00000615722 808 ntBASIC20.51■□□□□ 0.87
POLR3DP05423 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.51■□□□□ 0.87
POLR3DP05423 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
POLR3DP05423 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
POLR3DP05423 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.51■□□□□ 0.87
POLR3DP05423 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
POLR3DP05423 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
POLR3DP05423 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
POLR3DP05423 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
POLR3DP05423 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
POLR3DP05423 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.5■□□□□ 0.87
POLR3DP05423 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
POLR3DP05423 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
POLR3DP05423 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.5■□□□□ 0.87
POLR3DP05423 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
POLR3DP05423 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.5■□□□□ 0.87
POLR3DP05423 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
POLR3DP05423 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
POLR3DP05423 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
POLR3DP05423 YBX2P1-201ENST00000394192 760 ntBASIC20.5■□□□□ 0.87
POLR3DP05423 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.5■□□□□ 0.87
POLR3DP05423 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.5■□□□□ 0.87
POLR3DP05423 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.5■□□□□ 0.87
POLR3DP05423 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.5■□□□□ 0.87
POLR3DP05423 AC018845.2-201ENST00000568326 409 ntBASIC20.5■□□□□ 0.87
POLR3DP05423 AC010327.4-202ENST00000591484 748 ntBASIC20.5■□□□□ 0.87
POLR3DP05423 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.5■□□□□ 0.87
POLR3DP05423 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.5■□□□□ 0.87
POLR3DP05423 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.5■□□□□ 0.87
POLR3DP05423 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
POLR3DP05423 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.5■□□□□ 0.87
POLR3DP05423 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
POLR3DP05423 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.5■□□□□ 0.87
POLR3DP05423 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
POLR3DP05423 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
POLR3DP05423 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.5■□□□□ 0.87
POLR3DP05423 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
POLR3DP05423 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
POLR3DP05423 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
POLR3DP05423 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.49■□□□□ 0.87
POLR3DP05423 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
POLR3DP05423 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
POLR3DP05423 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
POLR3DP05423 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
POLR3DP05423 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
POLR3DP05423 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
POLR3DP05423 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.49■□□□□ 0.87
POLR3DP05423 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.49■□□□□ 0.87
POLR3DP05423 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.49■□□□□ 0.87
POLR3DP05423 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.49■□□□□ 0.87
POLR3DP05423 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
POLR3DP05423 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.49■□□□□ 0.87
POLR3DP05423 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
POLR3DP05423 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
POLR3DP05423 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
POLR3DP05423 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
POLR3DP05423 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.49■□□□□ 0.87
POLR3DP05423 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
POLR3DP05423 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
POLR3DP05423 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
POLR3DP05423 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
POLR3DP05423 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
POLR3DP05423 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
POLR3DP05423 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
POLR3DP05423 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
POLR3DP05423 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
POLR3DP05423 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
POLR3DP05423 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
POLR3DP05423 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.48■□□□□ 0.87
POLR3DP05423 AC004832.2-201ENST00000426397 482 ntBASIC20.48■□□□□ 0.87
POLR3DP05423 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
POLR3DP05423 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
POLR3DP05423 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.48■□□□□ 0.87
POLR3DP05423 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.48■□□□□ 0.87
POLR3DP05423 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.48■□□□□ 0.87
POLR3DP05423 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.48■□□□□ 0.87
POLR3DP05423 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
POLR3DP05423 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.48■□□□□ 0.87
POLR3DP05423 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
POLR3DP05423 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
POLR3DP05423 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
POLR3DP05423 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.47■□□□□ 0.87
POLR3DP05423 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
POLR3DP05423 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
POLR3DP05423 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
POLR3DP05423 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
POLR3DP05423 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms