Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 AL138831.2-201ENST00000606564 490 ntBASIC19.06■□□□□ 0.64
CLSTN1O94985 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLSTN1O94985 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.06■□□□□ 0.64
CLSTN1O94985 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CLSTN1O94985 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLSTN1O94985 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLSTN1O94985 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLSTN1O94985 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLSTN1O94985 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CLSTN1O94985 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLSTN1O94985 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLSTN1O94985 AC080080.1-201ENST00000625121 2420 ntBASIC19.05■□□□□ 0.64
CLSTN1O94985 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLSTN1O94985 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.05■□□□□ 0.64
CLSTN1O94985 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLSTN1O94985 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLSTN1O94985 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLSTN1O94985 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.05■□□□□ 0.64
CLSTN1O94985 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLSTN1O94985 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CLSTN1O94985 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLSTN1O94985 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLSTN1O94985 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLSTN1O94985 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLSTN1O94985 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLSTN1O94985 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CLSTN1O94985 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.05■□□□□ 0.64
CLSTN1O94985 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLSTN1O94985 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.05■□□□□ 0.64
CLSTN1O94985 BNIP3P18-201ENST00000593976 575 ntBASIC19.05■□□□□ 0.64
CLSTN1O94985 AC084018.2-201ENST00000613093 2607 ntBASIC19.05■□□□□ 0.64
CLSTN1O94985 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLSTN1O94985 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLSTN1O94985 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.05■□□□□ 0.64
CLSTN1O94985 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.05■□□□□ 0.64
CLSTN1O94985 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.05■□□□□ 0.64
CLSTN1O94985 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLSTN1O94985 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLSTN1O94985 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLSTN1O94985 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CLSTN1O94985 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLSTN1O94985 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLSTN1O94985 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLSTN1O94985 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CLSTN1O94985 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLSTN1O94985 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLSTN1O94985 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
CLSTN1O94985 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.04■□□□□ 0.64
CLSTN1O94985 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.04■□□□□ 0.64
CLSTN1O94985 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLSTN1O94985 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLSTN1O94985 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.04■□□□□ 0.64
CLSTN1O94985 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CLSTN1O94985 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.04■□□□□ 0.64
CLSTN1O94985 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.04■□□□□ 0.64
CLSTN1O94985 IGHV3-47-201ENST00000425060 335 ntBASIC19.04■□□□□ 0.64
CLSTN1O94985 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLSTN1O94985 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.04■□□□□ 0.64
CLSTN1O94985 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.04■□□□□ 0.64
CLSTN1O94985 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.04■□□□□ 0.64
CLSTN1O94985 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.04■□□□□ 0.64
CLSTN1O94985 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CLSTN1O94985 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.04■□□□□ 0.64
CLSTN1O94985 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CLSTN1O94985 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLSTN1O94985 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.04■□□□□ 0.64
CLSTN1O94985 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLSTN1O94985 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.04■□□□□ 0.64
CLSTN1O94985 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLSTN1O94985 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
CLSTN1O94985 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLSTN1O94985 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLSTN1O94985 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.04■□□□□ 0.64
CLSTN1O94985 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.04■□□□□ 0.64
CLSTN1O94985 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.03■□□□□ 0.64
CLSTN1O94985 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC19.03■□□□□ 0.64
CLSTN1O94985 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CLSTN1O94985 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.03■□□□□ 0.64
CLSTN1O94985 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CLSTN1O94985 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.03■□□□□ 0.64
CLSTN1O94985 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLSTN1O94985 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLSTN1O94985 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLSTN1O94985 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLSTN1O94985 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.03■□□□□ 0.64
CLSTN1O94985 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLSTN1O94985 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLSTN1O94985 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.03■□□□□ 0.64
CLSTN1O94985 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CLSTN1O94985 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLSTN1O94985 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.03■□□□□ 0.64
CLSTN1O94985 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.03■□□□□ 0.64
CLSTN1O94985 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.03■□□□□ 0.64
CLSTN1O94985 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.03■□□□□ 0.64
CLSTN1O94985 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.03■□□□□ 0.64
CLSTN1O94985 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.03■□□□□ 0.64
CLSTN1O94985 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.03■□□□□ 0.64
CLSTN1O94985 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.03■□□□□ 0.64
CLSTN1O94985 AL732292.2-201ENST00000609649 430 ntBASIC19.03■□□□□ 0.64
CLSTN1O94985 AL121772.3-201ENST00000610840 674 ntBASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms