Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.78■□□□□ 0.44
TRANK1O15050 AC008735.3-201ENST00000596646 500 ntBASIC17.78■□□□□ 0.44
TRANK1O15050 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.78■□□□□ 0.44
TRANK1O15050 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.78■□□□□ 0.44
TRANK1O15050 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRANK1O15050 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.78■□□□□ 0.44
TRANK1O15050 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRANK1O15050 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRANK1O15050 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TRANK1O15050 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.77■□□□□ 0.44
TRANK1O15050 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.77■□□□□ 0.44
TRANK1O15050 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.77■□□□□ 0.44
TRANK1O15050 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
TRANK1O15050 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TRANK1O15050 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRANK1O15050 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRANK1O15050 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRANK1O15050 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.77■□□□□ 0.44
TRANK1O15050 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRANK1O15050 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TRANK1O15050 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.77■□□□□ 0.44
TRANK1O15050 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRANK1O15050 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TRANK1O15050 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRANK1O15050 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRANK1O15050 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.77■□□□□ 0.43
TRANK1O15050 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRANK1O15050 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRANK1O15050 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRANK1O15050 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.43
TRANK1O15050 AC135586.1-201ENST00000539323 574 ntBASIC17.77■□□□□ 0.43
TRANK1O15050 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.77■□□□□ 0.43
TRANK1O15050 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRANK1O15050 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.77■□□□□ 0.43
TRANK1O15050 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.77■□□□□ 0.43
TRANK1O15050 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.77■□□□□ 0.43
TRANK1O15050 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
TRANK1O15050 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRANK1O15050 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRANK1O15050 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRANK1O15050 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TRANK1O15050 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.76■□□□□ 0.43
TRANK1O15050 CTBP2P3-201ENST00000585629 1255 ntBASIC17.76■□□□□ 0.43
TRANK1O15050 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.76■□□□□ 0.43
TRANK1O15050 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRANK1O15050 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.76■□□□□ 0.43
TRANK1O15050 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.76■□□□□ 0.43
TRANK1O15050 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.76■□□□□ 0.43
TRANK1O15050 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRANK1O15050 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRANK1O15050 FAM220BP-201ENST00000377689 816 ntBASIC17.76■□□□□ 0.43
TRANK1O15050 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.76■□□□□ 0.43
TRANK1O15050 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.76■□□□□ 0.43
TRANK1O15050 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.76■□□□□ 0.43
TRANK1O15050 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRANK1O15050 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.76■□□□□ 0.43
TRANK1O15050 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.76■□□□□ 0.43
TRANK1O15050 WASH4P-201ENST00000564273 1246 ntBASIC17.76■□□□□ 0.43
TRANK1O15050 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.76■□□□□ 0.43
TRANK1O15050 AL109936.8-201ENST00000641772 604 ntBASIC17.76■□□□□ 0.43
TRANK1O15050 AC012317.2-201ENST00000623305 2251 ntBASIC17.76■□□□□ 0.43
TRANK1O15050 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRANK1O15050 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRANK1O15050 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRANK1O15050 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRANK1O15050 SPDYE19P-201ENST00000338590 713 ntBASIC17.75■□□□□ 0.43
TRANK1O15050 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.75■□□□□ 0.43
TRANK1O15050 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.75■□□□□ 0.43
TRANK1O15050 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
TRANK1O15050 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRANK1O15050 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRANK1O15050 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.75■□□□□ 0.43
TRANK1O15050 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TRANK1O15050 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRANK1O15050 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TRANK1O15050 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TRANK1O15050 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.75■□□□□ 0.43
TRANK1O15050 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.75■□□□□ 0.43
TRANK1O15050 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.75■□□□□ 0.43
TRANK1O15050 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.75■□□□□ 0.43
TRANK1O15050 LYSMD4-203ENST00000378904 2122 ntBASIC17.75■□□□□ 0.43
TRANK1O15050 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRANK1O15050 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.75■□□□□ 0.43
TRANK1O15050 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.75■□□□□ 0.43
TRANK1O15050 FAM8A2P-201ENST00000528813 1142 ntBASIC17.75■□□□□ 0.43
TRANK1O15050 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.75■□□□□ 0.43
TRANK1O15050 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.75■□□□□ 0.43
TRANK1O15050 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRANK1O15050 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRANK1O15050 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRANK1O15050 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TRANK1O15050 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.75■□□□□ 0.43
TRANK1O15050 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRANK1O15050 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TRANK1O15050 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.75■□□□□ 0.43
TRANK1O15050 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRANK1O15050 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.75■□□□□ 0.43
TRANK1O15050 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.75■□□□□ 0.43
TRANK1O15050 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRANK1O15050 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms