Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TMEM256-PLSCR3K7ERE1 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
TMEM256-PLSCR3K7ERE1 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
TMEM256-PLSCR3K7ERE1 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC10.9□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AC022532.1-201ENST00000624563 1728 ntBASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 DUSP5P2-201ENST00000426873 1033 ntBASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 SRP19-202ENST00000445150 833 ntTSL 2 BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AC091390.4-202ENST00000476426 537 ntBASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 MIR3180-5-201ENST00000583743 153 ntBASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AC144831.1-201ENST00000573312 2656 ntBASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 BX276092.7-203ENST00000637198 1536 ntBASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC10.89□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 MED29-202ENST00000594368 1471 ntTSL 2 BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC10.88□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms