Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.4□□□□□ -0.1
TRBV6-7A0A0A0MS04 RN7SL606P-201ENST00000472779 293 ntBASIC14.4□□□□□ -0.1
TRBV6-7A0A0A0MS04 AC104640.1-201ENST00000562617 2109 ntBASIC14.4□□□□□ -0.1
TRBV6-7A0A0A0MS04 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.4□□□□□ -0.1
TRBV6-7A0A0A0MS04 AC111152.3-201ENST00000569699 673 ntBASIC14.4□□□□□ -0.1
TRBV6-7A0A0A0MS04 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV6-7A0A0A0MS04 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TRBV6-7A0A0A0MS04 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV6-7A0A0A0MS04 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.4□□□□□ -0.1
TRBV6-7A0A0A0MS04 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.4□□□□□ -0.1
TRBV6-7A0A0A0MS04 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV6-7A0A0A0MS04 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.4□□□□□ -0.1
TRBV6-7A0A0A0MS04 AC024909.3-201ENST00000611513 2257 ntBASIC14.4□□□□□ -0.1
TRBV6-7A0A0A0MS04 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV6-7A0A0A0MS04 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV6-7A0A0A0MS04 AL365203.3-201ENST00000609742 2057 ntBASIC14.4□□□□□ -0.1
TRBV6-7A0A0A0MS04 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV6-7A0A0A0MS04 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV6-7A0A0A0MS04 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV6-7A0A0A0MS04 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TRBV6-7A0A0A0MS04 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV6-7A0A0A0MS04 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 AL049757.1-201ENST00000616842 1596 ntBASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 KRT18P57-201ENST00000443599 1254 ntBASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 AL138831.2-201ENST00000606564 490 ntBASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 AC083849.1-201ENST00000615227 514 ntBASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV6-7A0A0A0MS04 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 OR6D1P-203ENST00000641209 4860 ntBASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TRBV6-7A0A0A0MS04 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms