Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 AC069335.1-201ENST00000489972 472 ntBASIC18.4■□□□□ 0.54
PCDHB7Q9Y5E2 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.4■□□□□ 0.54
PCDHB7Q9Y5E2 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PCDHB7Q9Y5E2 AC005498.2-205ENST00000593218 784 ntBASIC18.4■□□□□ 0.54
PCDHB7Q9Y5E2 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB7Q9Y5E2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB7Q9Y5E2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB7Q9Y5E2 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB7Q9Y5E2 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB7Q9Y5E2 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB7Q9Y5E2 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PCDHB7Q9Y5E2 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.54
PCDHB7Q9Y5E2 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.39■□□□□ 0.54
PCDHB7Q9Y5E2 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB7Q9Y5E2 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB7Q9Y5E2 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHB7Q9Y5E2 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB7Q9Y5E2 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB7Q9Y5E2 KRT18P32-201ENST00000424695 1287 ntBASIC18.39■□□□□ 0.53
PCDHB7Q9Y5E2 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDHB7Q9Y5E2 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.39■□□□□ 0.53
PCDHB7Q9Y5E2 AC015911.4-201ENST00000588022 1070 ntBASIC18.39■□□□□ 0.53
PCDHB7Q9Y5E2 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHB7Q9Y5E2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB7Q9Y5E2 AL355312.1-201ENST00000407115 2176 ntBASIC18.39■□□□□ 0.53
PCDHB7Q9Y5E2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHB7Q9Y5E2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB7Q9Y5E2 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB7Q9Y5E2 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHB7Q9Y5E2 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHB7Q9Y5E2 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB7Q9Y5E2 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB7Q9Y5E2 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHB7Q9Y5E2 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB7Q9Y5E2 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB7Q9Y5E2 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB7Q9Y5E2 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB7Q9Y5E2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB7Q9Y5E2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB7Q9Y5E2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB7Q9Y5E2 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB7Q9Y5E2 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDHB7Q9Y5E2 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHB7Q9Y5E2 AC092474.2-201ENST00000424288 719 ntBASIC18.38■□□□□ 0.53
PCDHB7Q9Y5E2 SLC25A6P5-201ENST00000435663 894 ntBASIC18.38■□□□□ 0.53
PCDHB7Q9Y5E2 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PCDHB7Q9Y5E2 IGHV3-62-201ENST00000520057 340 ntBASIC18.38■□□□□ 0.53
PCDHB7Q9Y5E2 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDHB7Q9Y5E2 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB7Q9Y5E2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB7Q9Y5E2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHB7Q9Y5E2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PCDHB7Q9Y5E2 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.38■□□□□ 0.53
PCDHB7Q9Y5E2 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB7Q9Y5E2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB7Q9Y5E2 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB7Q9Y5E2 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB7Q9Y5E2 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB7Q9Y5E2 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB7Q9Y5E2 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB7Q9Y5E2 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB7Q9Y5E2 AC133963.1-201ENST00000504166 1679 ntBASIC18.38■□□□□ 0.53
PCDHB7Q9Y5E2 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB7Q9Y5E2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB7Q9Y5E2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB7Q9Y5E2 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB7Q9Y5E2 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB7Q9Y5E2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB7Q9Y5E2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
PCDHB7Q9Y5E2 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB7Q9Y5E2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB7Q9Y5E2 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB7Q9Y5E2 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB7Q9Y5E2 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHB7Q9Y5E2 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB7Q9Y5E2 CNN2P2-201ENST00000443536 909 ntBASIC18.37■□□□□ 0.53
PCDHB7Q9Y5E2 CNN2P3-201ENST00000450201 906 ntBASIC18.37■□□□□ 0.53
PCDHB7Q9Y5E2 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHB7Q9Y5E2 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB7Q9Y5E2 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHB7Q9Y5E2 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB7Q9Y5E2 RNA5SP421-201ENST00000516864 134 ntBASIC18.37■□□□□ 0.53
PCDHB7Q9Y5E2 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB7Q9Y5E2 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.37■□□□□ 0.53
PCDHB7Q9Y5E2 DUX4L27-201ENST00000554796 1261 ntBASIC18.37■□□□□ 0.53
PCDHB7Q9Y5E2 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB7Q9Y5E2 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB7Q9Y5E2 AL009183.1-201ENST00000603760 355 ntBASIC18.37■□□□□ 0.53
PCDHB7Q9Y5E2 AL136317.3-201ENST00000618497 906 ntBASIC18.37■□□□□ 0.53
PCDHB7Q9Y5E2 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
PCDHB7Q9Y5E2 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB7Q9Y5E2 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
PCDHB7Q9Y5E2 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
PCDHB7Q9Y5E2 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PCDHB7Q9Y5E2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
PCDHB7Q9Y5E2 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB7Q9Y5E2 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB7Q9Y5E2 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB7Q9Y5E2 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB7Q9Y5E2 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms