Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
RTCBQ9Y3I0 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RTCBQ9Y3I0 AL138918.1-201ENST00000568306 659 ntBASIC21.46■■□□□ 1.03
RTCBQ9Y3I0 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC21.46■■□□□ 1.03
RTCBQ9Y3I0 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC21.46■■□□□ 1.03
RTCBQ9Y3I0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
RTCBQ9Y3I0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTCBQ9Y3I0 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.46■■□□□ 1.03
RTCBQ9Y3I0 SLC22A20-204ENST00000530038 1673 ntBASIC21.46■■□□□ 1.03
RTCBQ9Y3I0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTCBQ9Y3I0 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTCBQ9Y3I0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTCBQ9Y3I0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTCBQ9Y3I0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.46■■□□□ 1.03
RTCBQ9Y3I0 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTCBQ9Y3I0 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC21.45■■□□□ 1.03
RTCBQ9Y3I0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTCBQ9Y3I0 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC21.45■■□□□ 1.02
RTCBQ9Y3I0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
RTCBQ9Y3I0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTCBQ9Y3I0 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTCBQ9Y3I0 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC21.45■■□□□ 1.02
RTCBQ9Y3I0 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RTCBQ9Y3I0 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC21.45■■□□□ 1.02
RTCBQ9Y3I0 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC21.45■■□□□ 1.02
RTCBQ9Y3I0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
RTCBQ9Y3I0 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
RTCBQ9Y3I0 AC091167.2-201ENST00000579581 588 ntBASIC21.45■■□□□ 1.02
RTCBQ9Y3I0 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.45■■□□□ 1.02
RTCBQ9Y3I0 AC018529.1-201ENST00000613063 361 ntBASIC21.45■■□□□ 1.02
RTCBQ9Y3I0 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
RTCBQ9Y3I0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTCBQ9Y3I0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTCBQ9Y3I0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTCBQ9Y3I0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.45■■□□□ 1.02
RTCBQ9Y3I0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.45■■□□□ 1.02
RTCBQ9Y3I0 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTCBQ9Y3I0 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.44■■□□□ 1.02
RTCBQ9Y3I0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RTCBQ9Y3I0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
RTCBQ9Y3I0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
RTCBQ9Y3I0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
RTCBQ9Y3I0 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RTCBQ9Y3I0 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RTCBQ9Y3I0 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RTCBQ9Y3I0 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC21.44■■□□□ 1.02
RTCBQ9Y3I0 CALY-202ENST00000368555 783 ntTSL 2 BASIC21.44■■□□□ 1.02
RTCBQ9Y3I0 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC21.44■■□□□ 1.02
RTCBQ9Y3I0 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC21.44■■□□□ 1.02
RTCBQ9Y3I0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC21.44■■□□□ 1.02
RTCBQ9Y3I0 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RTCBQ9Y3I0 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC21.44■■□□□ 1.02
RTCBQ9Y3I0 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC21.44■■□□□ 1.02
RTCBQ9Y3I0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
RTCBQ9Y3I0 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RTCBQ9Y3I0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.44■■□□□ 1.02
RTCBQ9Y3I0 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RTCBQ9Y3I0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RTCBQ9Y3I0 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RTCBQ9Y3I0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
RTCBQ9Y3I0 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RTCBQ9Y3I0 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
RTCBQ9Y3I0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
RTCBQ9Y3I0 GRAMD4P3-201ENST00000621665 1669 ntBASIC21.44■■□□□ 1.02
RTCBQ9Y3I0 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC21.43■■□□□ 1.02
RTCBQ9Y3I0 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC21.43■■□□□ 1.02
RTCBQ9Y3I0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTCBQ9Y3I0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTCBQ9Y3I0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTCBQ9Y3I0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
RTCBQ9Y3I0 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
RTCBQ9Y3I0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTCBQ9Y3I0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RTCBQ9Y3I0 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC21.43■■□□□ 1.02
RTCBQ9Y3I0 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTCBQ9Y3I0 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC21.43■■□□□ 1.02
RTCBQ9Y3I0 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC21.43■■□□□ 1.02
RTCBQ9Y3I0 SPTLC1P1-201ENST00000447199 261 ntBASIC21.43■■□□□ 1.02
RTCBQ9Y3I0 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC21.43■■□□□ 1.02
RTCBQ9Y3I0 NAA50-208ENST00000497255 789 ntTSL 5 BASIC21.43■■□□□ 1.02
RTCBQ9Y3I0 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC21.43■■□□□ 1.02
RTCBQ9Y3I0 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC21.43■■□□□ 1.02
RTCBQ9Y3I0 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTCBQ9Y3I0 RARRES2P9-201ENST00000565168 469 ntBASIC21.43■■□□□ 1.02
RTCBQ9Y3I0 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC21.43■■□□□ 1.02
RTCBQ9Y3I0 SPDYE12P-201ENST00000618416 771 ntBASIC21.43■■□□□ 1.02
RTCBQ9Y3I0 MIR6752-201ENST00000618442 71 ntBASIC21.43■■□□□ 1.02
RTCBQ9Y3I0 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTCBQ9Y3I0 TOP3BP1-201ENST00000420768 1380 ntBASIC21.43■■□□□ 1.02
RTCBQ9Y3I0 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RTCBQ9Y3I0 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTCBQ9Y3I0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTCBQ9Y3I0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RTCBQ9Y3I0 NARF-206ENST00000457415 1668 ntTSL 5 BASIC21.43■■□□□ 1.02
RTCBQ9Y3I0 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RTCBQ9Y3I0 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RTCBQ9Y3I0 AC093503.3-201ENST00000624917 2352 ntBASIC21.43■■□□□ 1.02
RTCBQ9Y3I0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
RTCBQ9Y3I0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RTCBQ9Y3I0 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms