Protein–RNA interactions for Protein: Q9UJ99

CDH22, Cadherin-22, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH22Q9UJ99 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH22Q9UJ99 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH22Q9UJ99 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH22Q9UJ99 AC023141.5-201ENST00000458585 616 ntBASIC18.18■□□□□ 0.5
CDH22Q9UJ99 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH22Q9UJ99 CXCL1P1-201ENST00000502804 216 ntBASIC18.18■□□□□ 0.5
CDH22Q9UJ99 DUX4L27-201ENST00000554796 1261 ntBASIC18.18■□□□□ 0.5
CDH22Q9UJ99 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.18■□□□□ 0.5
CDH22Q9UJ99 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH22Q9UJ99 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.18■□□□□ 0.5
CDH22Q9UJ99 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.18■□□□□ 0.5
CDH22Q9UJ99 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.18■□□□□ 0.5
CDH22Q9UJ99 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CDH22Q9UJ99 AC007064.4-201ENST00000637740 555 ntBASIC18.18■□□□□ 0.5
CDH22Q9UJ99 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH22Q9UJ99 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH22Q9UJ99 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.18■□□□□ 0.5
CDH22Q9UJ99 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.18■□□□□ 0.5
CDH22Q9UJ99 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CDH22Q9UJ99 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH22Q9UJ99 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH22Q9UJ99 AC134043.2-201ENST00000624206 2238 ntBASIC18.18■□□□□ 0.5
CDH22Q9UJ99 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH22Q9UJ99 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH22Q9UJ99 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.18■□□□□ 0.5
CDH22Q9UJ99 AC099398.1-201ENST00000567919 2776 ntBASIC18.18■□□□□ 0.5
CDH22Q9UJ99 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH22Q9UJ99 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH22Q9UJ99 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
CDH22Q9UJ99 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
CDH22Q9UJ99 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH22Q9UJ99 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.17■□□□□ 0.5
CDH22Q9UJ99 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CDH22Q9UJ99 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH22Q9UJ99 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CDH22Q9UJ99 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH22Q9UJ99 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH22Q9UJ99 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH22Q9UJ99 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH22Q9UJ99 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.17■□□□□ 0.5
CDH22Q9UJ99 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH22Q9UJ99 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH22Q9UJ99 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH22Q9UJ99 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.17■□□□□ 0.5
CDH22Q9UJ99 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH22Q9UJ99 AC244107.1-201ENST00000442033 332 ntBASIC18.17■□□□□ 0.5
CDH22Q9UJ99 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.17■□□□□ 0.5
CDH22Q9UJ99 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH22Q9UJ99 GGTLC5P-201ENST00000617623 998 ntBASIC18.17■□□□□ 0.5
CDH22Q9UJ99 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.17■□□□□ 0.5
CDH22Q9UJ99 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CDH22Q9UJ99 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH22Q9UJ99 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.17■□□□□ 0.5
CDH22Q9UJ99 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.17■□□□□ 0.5
CDH22Q9UJ99 GNAS-203ENST00000306120 1878 ntBASIC18.17■□□□□ 0.5
CDH22Q9UJ99 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CDH22Q9UJ99 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH22Q9UJ99 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH22Q9UJ99 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH22Q9UJ99 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
CDH22Q9UJ99 AC009053.2-201ENST00000563701 2365 ntBASIC18.17■□□□□ 0.5
CDH22Q9UJ99 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.17■□□□□ 0.5
CDH22Q9UJ99 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
CDH22Q9UJ99 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH22Q9UJ99 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH22Q9UJ99 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH22Q9UJ99 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH22Q9UJ99 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH22Q9UJ99 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CDH22Q9UJ99 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH22Q9UJ99 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.16■□□□□ 0.5
CDH22Q9UJ99 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH22Q9UJ99 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CDH22Q9UJ99 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
CDH22Q9UJ99 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH22Q9UJ99 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH22Q9UJ99 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.16■□□□□ 0.5
CDH22Q9UJ99 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH22Q9UJ99 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.16■□□□□ 0.5
CDH22Q9UJ99 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.16■□□□□ 0.5
CDH22Q9UJ99 AC069262.1-201ENST00000539058 672 ntBASIC18.16■□□□□ 0.5
CDH22Q9UJ99 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.16■□□□□ 0.5
CDH22Q9UJ99 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH22Q9UJ99 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.16■□□□□ 0.5
CDH22Q9UJ99 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH22Q9UJ99 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH22Q9UJ99 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH22Q9UJ99 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH22Q9UJ99 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH22Q9UJ99 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.15■□□□□ 0.5
CDH22Q9UJ99 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDH22Q9UJ99 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
CDH22Q9UJ99 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CDH22Q9UJ99 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.15■□□□□ 0.5
CDH22Q9UJ99 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CDH22Q9UJ99 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.15■□□□□ 0.5
CDH22Q9UJ99 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH22Q9UJ99 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CDH22Q9UJ99 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH22Q9UJ99 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms