Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 PGM5P2-202ENST00000637225 1043 ntBASIC20.9■□□□□ 0.94
ECHDC1Q9NTX5 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ECHDC1Q9NTX5 AC022211.2-201ENST00000585075 2527 ntBASIC20.9■□□□□ 0.94
ECHDC1Q9NTX5 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ECHDC1Q9NTX5 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ECHDC1Q9NTX5 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
ECHDC1Q9NTX5 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.9■□□□□ 0.94
ECHDC1Q9NTX5 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ECHDC1Q9NTX5 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
ECHDC1Q9NTX5 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ECHDC1Q9NTX5 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ECHDC1Q9NTX5 AC020916.1-201ENST00000587762 1774 ntBASIC20.9■□□□□ 0.94
ECHDC1Q9NTX5 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
ECHDC1Q9NTX5 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.89■□□□□ 0.94
ECHDC1Q9NTX5 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.89■□□□□ 0.94
ECHDC1Q9NTX5 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
ECHDC1Q9NTX5 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ECHDC1Q9NTX5 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
ECHDC1Q9NTX5 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
ECHDC1Q9NTX5 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ECHDC1Q9NTX5 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.89■□□□□ 0.93
ECHDC1Q9NTX5 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ECHDC1Q9NTX5 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.89■□□□□ 0.93
ECHDC1Q9NTX5 IGHV3-65-201ENST00000523210 341 ntBASIC20.89■□□□□ 0.93
ECHDC1Q9NTX5 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.89■□□□□ 0.93
ECHDC1Q9NTX5 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ECHDC1Q9NTX5 AC005593.1-201ENST00000624894 515 ntBASIC20.89■□□□□ 0.93
ECHDC1Q9NTX5 AF228730.7-201ENST00000641842 219 ntBASIC20.89■□□□□ 0.93
ECHDC1Q9NTX5 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ECHDC1Q9NTX5 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ECHDC1Q9NTX5 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ECHDC1Q9NTX5 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
ECHDC1Q9NTX5 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ECHDC1Q9NTX5 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.89■□□□□ 0.93
ECHDC1Q9NTX5 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ECHDC1Q9NTX5 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
ECHDC1Q9NTX5 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ECHDC1Q9NTX5 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.89■□□□□ 0.93
ECHDC1Q9NTX5 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ECHDC1Q9NTX5 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.89■□□□□ 0.93
ECHDC1Q9NTX5 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.89■□□□□ 0.93
ECHDC1Q9NTX5 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ECHDC1Q9NTX5 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC20.89■□□□□ 0.93
ECHDC1Q9NTX5 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ECHDC1Q9NTX5 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.88■□□□□ 0.93
ECHDC1Q9NTX5 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ECHDC1Q9NTX5 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ECHDC1Q9NTX5 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ECHDC1Q9NTX5 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ECHDC1Q9NTX5 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
ECHDC1Q9NTX5 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
ECHDC1Q9NTX5 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ECHDC1Q9NTX5 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ECHDC1Q9NTX5 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.88■□□□□ 0.93
ECHDC1Q9NTX5 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
ECHDC1Q9NTX5 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ECHDC1Q9NTX5 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.88■□□□□ 0.93
ECHDC1Q9NTX5 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC20.88■□□□□ 0.93
ECHDC1Q9NTX5 AC098831.1-202ENST00000438821 336 ntBASIC20.88■□□□□ 0.93
ECHDC1Q9NTX5 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.88■□□□□ 0.93
ECHDC1Q9NTX5 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ECHDC1Q9NTX5 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.88■□□□□ 0.93
ECHDC1Q9NTX5 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
ECHDC1Q9NTX5 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ECHDC1Q9NTX5 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ECHDC1Q9NTX5 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ECHDC1Q9NTX5 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.88■□□□□ 0.93
ECHDC1Q9NTX5 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ECHDC1Q9NTX5 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ECHDC1Q9NTX5 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ECHDC1Q9NTX5 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.88■□□□□ 0.93
ECHDC1Q9NTX5 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ECHDC1Q9NTX5 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ECHDC1Q9NTX5 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ECHDC1Q9NTX5 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ECHDC1Q9NTX5 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ECHDC1Q9NTX5 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.88■□□□□ 0.93
ECHDC1Q9NTX5 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ECHDC1Q9NTX5 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ECHDC1Q9NTX5 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
ECHDC1Q9NTX5 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ECHDC1Q9NTX5 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ECHDC1Q9NTX5 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ECHDC1Q9NTX5 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ECHDC1Q9NTX5 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ECHDC1Q9NTX5 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ECHDC1Q9NTX5 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ECHDC1Q9NTX5 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ECHDC1Q9NTX5 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.87■□□□□ 0.93
ECHDC1Q9NTX5 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ECHDC1Q9NTX5 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ECHDC1Q9NTX5 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.87■□□□□ 0.93
ECHDC1Q9NTX5 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.87■□□□□ 0.93
ECHDC1Q9NTX5 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ECHDC1Q9NTX5 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
ECHDC1Q9NTX5 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ECHDC1Q9NTX5 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.87■□□□□ 0.93
ECHDC1Q9NTX5 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.87■□□□□ 0.93
ECHDC1Q9NTX5 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.87■□□□□ 0.93
ECHDC1Q9NTX5 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms