Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NKX6-2Q9C056 AL137784.3-201ENST00000623858 2288 ntBASIC13.95□□□□□ -0.18
NKX6-2Q9C056 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.95□□□□□ -0.18
NKX6-2Q9C056 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.95□□□□□ -0.18
NKX6-2Q9C056 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 AC009102.3-201ENST00000623118 1491 ntBASIC13.95□□□□□ -0.18
NKX6-2Q9C056 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 ADM-208ENST00000534464 1640 ntTSL 2 BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 MIR663A-201ENST00000385250 93 ntBASIC13.95□□□□□ -0.18
NKX6-2Q9C056 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 AC073111.5-205ENST00000641717 521 ntBASIC13.95□□□□□ -0.18
NKX6-2Q9C056 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 RHBDF1P1-201ENST00000427504 1941 ntBASIC13.95□□□□□ -0.18
NKX6-2Q9C056 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 AC013268.4-201ENST00000637413 2228 ntBASIC13.95□□□□□ -0.18
NKX6-2Q9C056 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 AC023908.3-201ENST00000564211 3047 ntBASIC13.95□□□□□ -0.18
NKX6-2Q9C056 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.95□□□□□ -0.18
NKX6-2Q9C056 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 MIR149-201ENST00000384879 89 ntBASIC13.94□□□□□ -0.18
NKX6-2Q9C056 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 AC083906.2-201ENST00000511578 360 ntBASIC13.94□□□□□ -0.18
NKX6-2Q9C056 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 KLF2-202ENST00000592003 564 ntTSL 3 BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.94□□□□□ -0.18
NKX6-2Q9C056 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 MIR600HG-201ENST00000449175 5984 ntBASIC13.94□□□□□ -0.18
NKX6-2Q9C056 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 SBF1P1-201ENST00000444527 5631 ntBASIC13.94□□□□□ -0.18
NKX6-2Q9C056 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX6-2Q9C056 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX6-2Q9C056 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX6-2Q9C056 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX6-2Q9C056 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX6-2Q9C056 AC139749.1-202ENST00000617529 3139 ntBASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms