Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CHAMP1Q96JM3 HLA-A-202ENST00000376806 1854 ntBASIC19.94■□□□□ 0.78
CHAMP1Q96JM3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CHAMP1Q96JM3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHAMP1Q96JM3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHAMP1Q96JM3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHAMP1Q96JM3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHAMP1Q96JM3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.94■□□□□ 0.78
CHAMP1Q96JM3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHAMP1Q96JM3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.94■□□□□ 0.78
CHAMP1Q96JM3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.94■□□□□ 0.78
CHAMP1Q96JM3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.94■□□□□ 0.78
CHAMP1Q96JM3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHAMP1Q96JM3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHAMP1Q96JM3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.94■□□□□ 0.78
CHAMP1Q96JM3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHAMP1Q96JM3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHAMP1Q96JM3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHAMP1Q96JM3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.94■□□□□ 0.78
CHAMP1Q96JM3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CHAMP1Q96JM3 AL138831.2-201ENST00000606564 490 ntBASIC19.94■□□□□ 0.78
CHAMP1Q96JM3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.94■□□□□ 0.78
CHAMP1Q96JM3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHAMP1Q96JM3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHAMP1Q96JM3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHAMP1Q96JM3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHAMP1Q96JM3 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CHAMP1Q96JM3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.93■□□□□ 0.78
CHAMP1Q96JM3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHAMP1Q96JM3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.93■□□□□ 0.78
CHAMP1Q96JM3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CHAMP1Q96JM3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.93■□□□□ 0.78
CHAMP1Q96JM3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.93■□□□□ 0.78
CHAMP1Q96JM3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CHAMP1Q96JM3 RNF152P1-201ENST00000397754 604 ntBASIC19.93■□□□□ 0.78
CHAMP1Q96JM3 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CHAMP1Q96JM3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.93■□□□□ 0.78
CHAMP1Q96JM3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHAMP1Q96JM3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHAMP1Q96JM3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
CHAMP1Q96JM3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.93■□□□□ 0.78
CHAMP1Q96JM3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.93■□□□□ 0.78
CHAMP1Q96JM3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.93■□□□□ 0.78
CHAMP1Q96JM3 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.93■□□□□ 0.78
CHAMP1Q96JM3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.93■□□□□ 0.78
CHAMP1Q96JM3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.93■□□□□ 0.78
CHAMP1Q96JM3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.93■□□□□ 0.78
CHAMP1Q96JM3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.93■□□□□ 0.78
CHAMP1Q96JM3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHAMP1Q96JM3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHAMP1Q96JM3 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHAMP1Q96JM3 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHAMP1Q96JM3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHAMP1Q96JM3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.93■□□□□ 0.78
CHAMP1Q96JM3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.93■□□□□ 0.78
CHAMP1Q96JM3 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC19.93■□□□□ 0.78
CHAMP1Q96JM3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC19.93■□□□□ 0.78
CHAMP1Q96JM3 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHAMP1Q96JM3 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CHAMP1Q96JM3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHAMP1Q96JM3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHAMP1Q96JM3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.92■□□□□ 0.78
CHAMP1Q96JM3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.92■□□□□ 0.78
CHAMP1Q96JM3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.92■□□□□ 0.78
CHAMP1Q96JM3 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHAMP1Q96JM3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHAMP1Q96JM3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHAMP1Q96JM3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHAMP1Q96JM3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CHAMP1Q96JM3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHAMP1Q96JM3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.92■□□□□ 0.78
CHAMP1Q96JM3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
CHAMP1Q96JM3 AL592071.1-201ENST00000611956 408 ntBASIC19.92■□□□□ 0.78
CHAMP1Q96JM3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHAMP1Q96JM3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHAMP1Q96JM3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHAMP1Q96JM3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHAMP1Q96JM3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHAMP1Q96JM3 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHAMP1Q96JM3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.92■□□□□ 0.78
CHAMP1Q96JM3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CHAMP1Q96JM3 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC19.92■□□□□ 0.78
CHAMP1Q96JM3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CHAMP1Q96JM3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHAMP1Q96JM3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHAMP1Q96JM3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHAMP1Q96JM3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHAMP1Q96JM3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHAMP1Q96JM3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.91■□□□□ 0.78
CHAMP1Q96JM3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHAMP1Q96JM3 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHAMP1Q96JM3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC19.91■□□□□ 0.78
CHAMP1Q96JM3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CHAMP1Q96JM3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHAMP1Q96JM3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHAMP1Q96JM3 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHAMP1Q96JM3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHAMP1Q96JM3 AK4P3-201ENST00000418260 669 ntBASIC19.91■□□□□ 0.78
CHAMP1Q96JM3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.91■□□□□ 0.78
CHAMP1Q96JM3 IGHV3-52-201ENST00000519770 353 ntBASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms