Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
HPS1Q92902 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HPS1Q92902 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HPS1Q92902 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HPS1Q92902 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HPS1Q92902 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HPS1Q92902 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HPS1Q92902 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HPS1Q92902 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HPS1Q92902 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HPS1Q92902 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.81■□□□□ 0.12
HPS1Q92902 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HPS1Q92902 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HPS1Q92902 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HPS1Q92902 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HPS1Q92902 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HPS1Q92902 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HPS1Q92902 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HPS1Q92902 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.81■□□□□ 0.12
HPS1Q92902 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HPS1Q92902 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.81■□□□□ 0.12
HPS1Q92902 AL359075.1-203ENST00000462729 1002 ntBASIC15.81■□□□□ 0.12
HPS1Q92902 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.81■□□□□ 0.12
HPS1Q92902 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC15.81■□□□□ 0.12
HPS1Q92902 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
HPS1Q92902 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.81■□□□□ 0.12
HPS1Q92902 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HPS1Q92902 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HPS1Q92902 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
HPS1Q92902 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HPS1Q92902 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
HPS1Q92902 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.81■□□□□ 0.12
HPS1Q92902 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HPS1Q92902 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HPS1Q92902 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS1Q92902 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
HPS1Q92902 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HPS1Q92902 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.8■□□□□ 0.12
HPS1Q92902 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS1Q92902 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HPS1Q92902 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS1Q92902 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
HPS1Q92902 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS1Q92902 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
HPS1Q92902 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
HPS1Q92902 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.8■□□□□ 0.12
HPS1Q92902 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS1Q92902 HEIH-201ENST00000623091 1652 ntBASIC15.8■□□□□ 0.12
HPS1Q92902 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HPS1Q92902 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
HPS1Q92902 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS1Q92902 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS1Q92902 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS1Q92902 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
HPS1Q92902 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
HPS1Q92902 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS1Q92902 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS1Q92902 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.8■□□□□ 0.12
HPS1Q92902 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS1Q92902 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.8■□□□□ 0.12
HPS1Q92902 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.8■□□□□ 0.12
HPS1Q92902 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HPS1Q92902 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.8■□□□□ 0.12
HPS1Q92902 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.8■□□□□ 0.12
HPS1Q92902 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.8■□□□□ 0.12
HPS1Q92902 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.8■□□□□ 0.12
HPS1Q92902 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HPS1Q92902 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
HPS1Q92902 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.8■□□□□ 0.12
HPS1Q92902 AC006213.4-201ENST00000616184 634 ntBASIC15.8■□□□□ 0.12
HPS1Q92902 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.8■□□□□ 0.12
HPS1Q92902 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.8■□□□□ 0.12
HPS1Q92902 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS1Q92902 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.8■□□□□ 0.12
HPS1Q92902 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS1Q92902 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
HPS1Q92902 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS1Q92902 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS1Q92902 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS1Q92902 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS1Q92902 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HPS1Q92902 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HPS1Q92902 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HPS1Q92902 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HPS1Q92902 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.79■□□□□ 0.12
HPS1Q92902 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.79■□□□□ 0.12
HPS1Q92902 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HPS1Q92902 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.79■□□□□ 0.12
HPS1Q92902 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
HPS1Q92902 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HPS1Q92902 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HPS1Q92902 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
HPS1Q92902 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HPS1Q92902 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HPS1Q92902 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.79■□□□□ 0.12
HPS1Q92902 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HPS1Q92902 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
HPS1Q92902 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.79■□□□□ 0.12
HPS1Q92902 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
HPS1Q92902 STARP1-201ENST00000397973 869 ntBASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms