Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TRIM42Q8IWZ5 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM42Q8IWZ5 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TRIM42Q8IWZ5 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM42Q8IWZ5 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM42Q8IWZ5 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM42Q8IWZ5 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM42Q8IWZ5 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM42Q8IWZ5 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM42Q8IWZ5 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.2■□□□□ 0.34
TRIM42Q8IWZ5 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 AC113347.1-201ENST00000413321 391 ntBASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 AC004263.2-201ENST00000617183 678 ntBASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 AC022188.1-201ENST00000620960 1664 ntBASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM42Q8IWZ5 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 LIN28AP1-201ENST00000429574 405 ntBASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 PCDHB17P-201ENST00000539533 2393 ntBASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 AL662844.4-201ENST00000606367 2838 ntBASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 PCDHA1-201ENST00000378133 2726 ntBASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
TRIM42Q8IWZ5 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms