Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.59■□□□□ 0.09
SHFQ7M4L6 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.59■□□□□ 0.09
SHFQ7M4L6 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHFQ7M4L6 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.59■□□□□ 0.09
SHFQ7M4L6 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHFQ7M4L6 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SHFQ7M4L6 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHFQ7M4L6 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SHFQ7M4L6 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
SHFQ7M4L6 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.59■□□□□ 0.09
SHFQ7M4L6 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SHFQ7M4L6 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.59■□□□□ 0.09
SHFQ7M4L6 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHFQ7M4L6 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
SHFQ7M4L6 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHFQ7M4L6 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.58■□□□□ 0.09
SHFQ7M4L6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SHFQ7M4L6 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SHFQ7M4L6 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.58■□□□□ 0.09
SHFQ7M4L6 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SHFQ7M4L6 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.58■□□□□ 0.09
SHFQ7M4L6 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SHFQ7M4L6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SHFQ7M4L6 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHFQ7M4L6 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
SHFQ7M4L6 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHFQ7M4L6 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
SHFQ7M4L6 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.58■□□□□ 0.08
SHFQ7M4L6 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SHFQ7M4L6 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHFQ7M4L6 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHFQ7M4L6 RNF152P1-201ENST00000397754 604 ntBASIC15.58■□□□□ 0.08
SHFQ7M4L6 TSPY5P-201ENST00000426936 936 ntBASIC15.58■□□□□ 0.08
SHFQ7M4L6 AC117947.1-201ENST00000427448 529 ntBASIC15.58■□□□□ 0.08
SHFQ7M4L6 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHFQ7M4L6 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.58■□□□□ 0.08
SHFQ7M4L6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHFQ7M4L6 AC012306.2-201ENST00000609350 630 ntBASIC15.58■□□□□ 0.08
SHFQ7M4L6 AC073912.3-201ENST00000624414 853 ntBASIC15.58■□□□□ 0.08
SHFQ7M4L6 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SHFQ7M4L6 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHFQ7M4L6 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.58■□□□□ 0.08
SHFQ7M4L6 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
SHFQ7M4L6 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SHFQ7M4L6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.58■□□□□ 0.08
SHFQ7M4L6 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHFQ7M4L6 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
SHFQ7M4L6 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.58■□□□□ 0.08
SHFQ7M4L6 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHFQ7M4L6 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHFQ7M4L6 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SHFQ7M4L6 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
SHFQ7M4L6 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHFQ7M4L6 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHFQ7M4L6 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHFQ7M4L6 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SHFQ7M4L6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.58■□□□□ 0.08
SHFQ7M4L6 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHFQ7M4L6 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.58■□□□□ 0.08
SHFQ7M4L6 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHFQ7M4L6 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.58■□□□□ 0.08
SHFQ7M4L6 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SHFQ7M4L6 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SHFQ7M4L6 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHFQ7M4L6 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHFQ7M4L6 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHFQ7M4L6 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHFQ7M4L6 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.57■□□□□ 0.08
SHFQ7M4L6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.57■□□□□ 0.08
SHFQ7M4L6 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHFQ7M4L6 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SHFQ7M4L6 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SHFQ7M4L6 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.57■□□□□ 0.08
SHFQ7M4L6 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
SHFQ7M4L6 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHFQ7M4L6 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.57■□□□□ 0.08
SHFQ7M4L6 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHFQ7M4L6 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.57■□□□□ 0.08
SHFQ7M4L6 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SHFQ7M4L6 AC006449.5-201ENST00000610658 2098 ntBASIC15.57■□□□□ 0.08
SHFQ7M4L6 HBZP1-201ENST00000354915 429 ntBASIC15.57■□□□□ 0.08
SHFQ7M4L6 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHFQ7M4L6 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.57■□□□□ 0.08
SHFQ7M4L6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
SHFQ7M4L6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
SHFQ7M4L6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SHFQ7M4L6 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SHFQ7M4L6 AC002558.1-201ENST00000488906 803 ntBASIC15.57■□□□□ 0.08
SHFQ7M4L6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.57■□□□□ 0.08
SHFQ7M4L6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
SHFQ7M4L6 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.57■□□□□ 0.08
SHFQ7M4L6 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.57■□□□□ 0.08
SHFQ7M4L6 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SHFQ7M4L6 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHFQ7M4L6 AC097374.2-201ENST00000618617 1306 ntBASIC15.57■□□□□ 0.08
SHFQ7M4L6 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
SHFQ7M4L6 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SHFQ7M4L6 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHFQ7M4L6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHFQ7M4L6 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms