Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-BQ31612 TNXA-203ENST00000507684 2038 ntBASIC16.57■□□□□ 0.24
HLA-BQ31612 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HLA-BQ31612 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-BQ31612 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.57■□□□□ 0.24
HLA-BQ31612 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.57■□□□□ 0.24
HLA-BQ31612 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.57■□□□□ 0.24
HLA-BQ31612 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-BQ31612 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HLA-BQ31612 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-BQ31612 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.57■□□□□ 0.24
HLA-BQ31612 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
HLA-BQ31612 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-BQ31612 AC097493.3-201ENST00000509725 367 ntBASIC16.57■□□□□ 0.24
HLA-BQ31612 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.57■□□□□ 0.24
HLA-BQ31612 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.57■□□□□ 0.24
HLA-BQ31612 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
HLA-BQ31612 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.57■□□□□ 0.24
HLA-BQ31612 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.57■□□□□ 0.24
HLA-BQ31612 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-BQ31612 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.57■□□□□ 0.24
HLA-BQ31612 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HLA-BQ31612 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-BQ31612 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.57■□□□□ 0.24
HLA-BQ31612 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-BQ31612 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.57■□□□□ 0.24
HLA-BQ31612 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-BQ31612 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.56■□□□□ 0.24
HLA-BQ31612 LINC00304-203ENST00000565008 1864 ntBASIC16.56■□□□□ 0.24
HLA-BQ31612 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
HLA-BQ31612 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.56■□□□□ 0.24
HLA-BQ31612 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
HLA-BQ31612 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-BQ31612 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-BQ31612 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-BQ31612 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.56■□□□□ 0.24
HLA-BQ31612 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-BQ31612 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-BQ31612 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HLA-BQ31612 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-BQ31612 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-BQ31612 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.56■□□□□ 0.24
HLA-BQ31612 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-BQ31612 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.56■□□□□ 0.24
HLA-BQ31612 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.56■□□□□ 0.24
HLA-BQ31612 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.56■□□□□ 0.24
HLA-BQ31612 ALG1L8P-201ENST00000533887 760 ntBASIC16.56■□□□□ 0.24
HLA-BQ31612 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-BQ31612 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.56■□□□□ 0.24
HLA-BQ31612 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
HLA-BQ31612 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.56■□□□□ 0.24
HLA-BQ31612 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-BQ31612 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
HLA-BQ31612 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HLA-BQ31612 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-BQ31612 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HLA-BQ31612 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
HLA-BQ31612 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-BQ31612 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-BQ31612 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.56■□□□□ 0.24
HLA-BQ31612 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-BQ31612 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.56■□□□□ 0.24
HLA-BQ31612 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-BQ31612 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-BQ31612 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
HLA-BQ31612 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-BQ31612 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-BQ31612 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-BQ31612 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.55■□□□□ 0.24
HLA-BQ31612 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-BQ31612 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
HLA-BQ31612 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
HLA-BQ31612 GNAS-203ENST00000306120 1878 ntBASIC16.55■□□□□ 0.24
HLA-BQ31612 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-BQ31612 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-BQ31612 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-BQ31612 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HLA-BQ31612 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-BQ31612 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.55■□□□□ 0.24
HLA-BQ31612 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-BQ31612 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.55■□□□□ 0.24
HLA-BQ31612 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.55■□□□□ 0.24
HLA-BQ31612 AC008267.7-201ENST00000624570 1194 ntBASIC16.55■□□□□ 0.24
HLA-BQ31612 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
HLA-BQ31612 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-BQ31612 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-BQ31612 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HLA-BQ31612 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-BQ31612 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HLA-BQ31612 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-BQ31612 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
HLA-BQ31612 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-BQ31612 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HLA-BQ31612 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.55■□□□□ 0.24
HLA-BQ31612 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.55■□□□□ 0.24
HLA-BQ31612 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-BQ31612 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-BQ31612 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-BQ31612 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-BQ31612 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms