Protein–RNA interactions for Protein: Q07343

PDE4B, cAMP-specific 3',5'-cyclic phosphodiesterase 4B, humanhuman

Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4BQ07343 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
PDE4BQ07343 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PDE4BQ07343 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PDE4BQ07343 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDE4BQ07343 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
PDE4BQ07343 AL645608.8-201ENST00000606034 2086 ntBASIC20.3■□□□□ 0.84
PDE4BQ07343 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDE4BQ07343 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDE4BQ07343 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDE4BQ07343 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDE4BQ07343 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDE4BQ07343 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDE4BQ07343 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDE4BQ07343 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PDE4BQ07343 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.29■□□□□ 0.84
PDE4BQ07343 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.29■□□□□ 0.84
PDE4BQ07343 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDE4BQ07343 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.29■□□□□ 0.84
PDE4BQ07343 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDE4BQ07343 AC116353.5-201ENST00000638148 1699 ntBASIC20.29■□□□□ 0.84
PDE4BQ07343 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDE4BQ07343 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.29■□□□□ 0.84
PDE4BQ07343 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PDE4BQ07343 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDE4BQ07343 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.28■□□□□ 0.84
PDE4BQ07343 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.28■□□□□ 0.84
PDE4BQ07343 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.28■□□□□ 0.84
PDE4BQ07343 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE4BQ07343 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDE4BQ07343 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE4BQ07343 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE4BQ07343 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE4BQ07343 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.28■□□□□ 0.84
PDE4BQ07343 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PDE4BQ07343 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDE4BQ07343 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE4BQ07343 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PDE4BQ07343 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.28■□□□□ 0.84
PDE4BQ07343 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
PDE4BQ07343 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE4BQ07343 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDE4BQ07343 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PDE4BQ07343 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDE4BQ07343 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.28■□□□□ 0.84
PDE4BQ07343 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.28■□□□□ 0.84
PDE4BQ07343 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.28■□□□□ 0.84
PDE4BQ07343 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PDE4BQ07343 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.28■□□□□ 0.84
PDE4BQ07343 EGFEM1P-202ENST00000431685 1563 ntBASIC20.28■□□□□ 0.84
PDE4BQ07343 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.28■□□□□ 0.84
PDE4BQ07343 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.28■□□□□ 0.84
PDE4BQ07343 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PDE4BQ07343 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE4BQ07343 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDE4BQ07343 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PDE4BQ07343 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.28■□□□□ 0.84
PDE4BQ07343 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE4BQ07343 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.28■□□□□ 0.84
PDE4BQ07343 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE4BQ07343 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE4BQ07343 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE4BQ07343 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PDE4BQ07343 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PDE4BQ07343 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.27■□□□□ 0.84
PDE4BQ07343 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.27■□□□□ 0.84
PDE4BQ07343 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE4BQ07343 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE4BQ07343 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE4BQ07343 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE4BQ07343 CROCCP2-202ENST00000412962 2773 ntBASIC20.27■□□□□ 0.84
PDE4BQ07343 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.27■□□□□ 0.84
PDE4BQ07343 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.27■□□□□ 0.84
PDE4BQ07343 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PDE4BQ07343 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PDE4BQ07343 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PDE4BQ07343 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.27■□□□□ 0.84
PDE4BQ07343 HCG4B-203ENST00000450128 991 ntBASIC20.27■□□□□ 0.84
PDE4BQ07343 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PDE4BQ07343 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.27■□□□□ 0.84
PDE4BQ07343 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PDE4BQ07343 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.84
PDE4BQ07343 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE4BQ07343 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
PDE4BQ07343 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE4BQ07343 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.27■□□□□ 0.84
PDE4BQ07343 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PDE4BQ07343 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PDE4BQ07343 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.27■□□□□ 0.84
PDE4BQ07343 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PDE4BQ07343 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDE4BQ07343 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDE4BQ07343 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDE4BQ07343 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.26■□□□□ 0.83
PDE4BQ07343 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.26■□□□□ 0.83
PDE4BQ07343 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PDE4BQ07343 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.26■□□□□ 0.83
PDE4BQ07343 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.26■□□□□ 0.83
PDE4BQ07343 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDE4BQ07343 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDE4BQ07343 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms