Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
PMS1P54277 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PMS1P54277 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PMS1P54277 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.92■□□□□ 0.62
PMS1P54277 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PMS1P54277 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PMS1P54277 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PMS1P54277 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PMS1P54277 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PMS1P54277 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PMS1P54277 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PMS1P54277 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PMS1P54277 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PMS1P54277 ACTG1P4-201ENST00000425123 1122 ntBASIC18.91■□□□□ 0.62
PMS1P54277 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.91■□□□□ 0.62
PMS1P54277 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PMS1P54277 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.91■□□□□ 0.62
PMS1P54277 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.91■□□□□ 0.62
PMS1P54277 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.91■□□□□ 0.62
PMS1P54277 AL591684.3-201ENST00000605187 298 ntBASIC18.91■□□□□ 0.62
PMS1P54277 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PMS1P54277 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PMS1P54277 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.91■□□□□ 0.62
PMS1P54277 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.91■□□□□ 0.62
PMS1P54277 AC079328.2-201ENST00000561241 3354 ntBASIC18.91■□□□□ 0.62
PMS1P54277 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PMS1P54277 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PMS1P54277 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.91■□□□□ 0.62
PMS1P54277 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PMS1P54277 AL645728.1-201ENST00000366221 2101 ntBASIC18.91■□□□□ 0.62
PMS1P54277 AP005117.1-201ENST00000584346 1413 ntBASIC18.91■□□□□ 0.62
PMS1P54277 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
PMS1P54277 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PMS1P54277 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.9■□□□□ 0.62
PMS1P54277 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.9■□□□□ 0.62
PMS1P54277 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PMS1P54277 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PMS1P54277 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.9■□□□□ 0.62
PMS1P54277 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PMS1P54277 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PMS1P54277 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.9■□□□□ 0.62
PMS1P54277 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PMS1P54277 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.9■□□□□ 0.62
PMS1P54277 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PMS1P54277 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.9■□□□□ 0.62
PMS1P54277 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.9■□□□□ 0.62
PMS1P54277 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.9■□□□□ 0.62
PMS1P54277 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.9■□□□□ 0.62
PMS1P54277 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
PMS1P54277 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PMS1P54277 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PMS1P54277 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.89■□□□□ 0.61
PMS1P54277 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
PMS1P54277 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PMS1P54277 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PMS1P54277 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PMS1P54277 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PMS1P54277 LINC00982-205ENST00000420957 435 ntBASIC18.89■□□□□ 0.61
PMS1P54277 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PMS1P54277 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.89■□□□□ 0.61
PMS1P54277 BX005266.1-201ENST00000473402 457 ntBASIC18.89■□□□□ 0.61
PMS1P54277 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.89■□□□□ 0.61
PMS1P54277 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.89■□□□□ 0.61
PMS1P54277 AL732292.2-201ENST00000609649 430 ntBASIC18.89■□□□□ 0.61
PMS1P54277 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.89■□□□□ 0.61
PMS1P54277 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PMS1P54277 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PMS1P54277 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PMS1P54277 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PMS1P54277 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
PMS1P54277 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PMS1P54277 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PMS1P54277 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PMS1P54277 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PMS1P54277 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PMS1P54277 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PMS1P54277 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.89■□□□□ 0.61
PMS1P54277 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.89■□□□□ 0.61
PMS1P54277 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.89■□□□□ 0.61
PMS1P54277 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PMS1P54277 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.89■□□□□ 0.61
PMS1P54277 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.89■□□□□ 0.61
PMS1P54277 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.89■□□□□ 0.61
PMS1P54277 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PMS1P54277 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PMS1P54277 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.88■□□□□ 0.61
PMS1P54277 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PMS1P54277 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PMS1P54277 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
PMS1P54277 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.88■□□□□ 0.61
PMS1P54277 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PMS1P54277 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PMS1P54277 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PMS1P54277 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PMS1P54277 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PMS1P54277 UPK3BP1-201ENST00000428678 509 ntBASIC18.88■□□□□ 0.61
PMS1P54277 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PMS1P54277 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.88■□□□□ 0.61
PMS1P54277 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PMS1P54277 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms