Protein–RNA interactions for Protein: P52798

EFNA4, Ephrin-A4, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA4P52798 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNA4P52798 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNA4P52798 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.36□□□□□ -0.11
EFNA4P52798 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.36□□□□□ -0.11
EFNA4P52798 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.36□□□□□ -0.11
EFNA4P52798 AC005412.3-201ENST00000580309 715 ntBASIC14.36□□□□□ -0.11
EFNA4P52798 AC022145.2-201ENST00000598203 171 ntBASIC14.36□□□□□ -0.11
EFNA4P52798 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC14.36□□□□□ -0.11
EFNA4P52798 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EFNA4P52798 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNA4P52798 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EFNA4P52798 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNA4P52798 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNA4P52798 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNA4P52798 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNA4P52798 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.36□□□□□ -0.11
EFNA4P52798 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
EFNA4P52798 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
EFNA4P52798 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
EFNA4P52798 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.36□□□□□ -0.11
EFNA4P52798 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNA4P52798 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
EFNA4P52798 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA4P52798 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.35□□□□□ -0.11
EFNA4P52798 AC135050.7-201ENST00000624508 2218 ntBASIC14.35□□□□□ -0.11
EFNA4P52798 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.35□□□□□ -0.11
EFNA4P52798 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA4P52798 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.35□□□□□ -0.11
EFNA4P52798 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.35□□□□□ -0.11
EFNA4P52798 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA4P52798 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA4P52798 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA4P52798 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA4P52798 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.35□□□□□ -0.11
EFNA4P52798 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
EFNA4P52798 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA4P52798 AL355312.1-201ENST00000407115 2176 ntBASIC14.35□□□□□ -0.11
EFNA4P52798 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA4P52798 AL671277.1-201ENST00000429656 993 ntBASIC14.35□□□□□ -0.11
EFNA4P52798 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA4P52798 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA4P52798 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.35□□□□□ -0.11
EFNA4P52798 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.35□□□□□ -0.11
EFNA4P52798 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.35□□□□□ -0.11
EFNA4P52798 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.35□□□□□ -0.11
EFNA4P52798 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.35□□□□□ -0.11
EFNA4P52798 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA4P52798 AC025678.2-201ENST00000562061 970 ntBASIC14.35□□□□□ -0.11
EFNA4P52798 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA4P52798 AC026120.1-201ENST00000611536 926 ntBASIC14.35□□□□□ -0.11
EFNA4P52798 AC106028.4-201ENST00000614509 607 ntBASIC14.35□□□□□ -0.11
EFNA4P52798 AC093028.1-201ENST00000622998 982 ntBASIC14.35□□□□□ -0.11
EFNA4P52798 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA4P52798 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA4P52798 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA4P52798 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
EFNA4P52798 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA4P52798 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.35□□□□□ -0.11
EFNA4P52798 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA4P52798 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
EFNA4P52798 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA4P52798 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA4P52798 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA4P52798 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
EFNA4P52798 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.35□□□□□ -0.11
EFNA4P52798 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA4P52798 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.34□□□□□ -0.11
EFNA4P52798 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC14.34□□□□□ -0.11
EFNA4P52798 AC007613.1-201ENST00000572811 2597 ntBASIC14.34□□□□□ -0.11
EFNA4P52798 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA4P52798 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
EFNA4P52798 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
EFNA4P52798 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA4P52798 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
EFNA4P52798 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.34□□□□□ -0.11
EFNA4P52798 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
EFNA4P52798 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA4P52798 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA4P52798 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.34□□□□□ -0.11
EFNA4P52798 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA4P52798 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA4P52798 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA4P52798 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA4P52798 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
EFNA4P52798 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
EFNA4P52798 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.34□□□□□ -0.11
EFNA4P52798 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.34□□□□□ -0.11
EFNA4P52798 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.34□□□□□ -0.11
EFNA4P52798 TIMM8BP1-201ENST00000452384 211 ntBASIC14.34□□□□□ -0.11
EFNA4P52798 AC023141.5-201ENST00000458585 616 ntBASIC14.34□□□□□ -0.11
EFNA4P52798 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.34□□□□□ -0.11
EFNA4P52798 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
EFNA4P52798 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC14.34□□□□□ -0.11
EFNA4P52798 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.34□□□□□ -0.11
EFNA4P52798 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
EFNA4P52798 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
EFNA4P52798 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.34□□□□□ -0.11
EFNA4P52798 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA4P52798 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
EFNA4P52798 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms