Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 LINC00167-201ENST00000530583 1419 ntBASIC15.32■□□□□ 0.04
SRP9P49458 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.32■□□□□ 0.04
SRP9P49458 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.32■□□□□ 0.04
SRP9P49458 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.32■□□□□ 0.04
SRP9P49458 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SRP9P49458 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRP9P49458 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRP9P49458 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SRP9P49458 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.32■□□□□ 0.04
SRP9P49458 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRP9P49458 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRP9P49458 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SRP9P49458 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.31■□□□□ 0.04
SRP9P49458 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRP9P49458 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
SRP9P49458 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRP9P49458 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRP9P49458 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SRP9P49458 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.31■□□□□ 0.04
SRP9P49458 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRP9P49458 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.31■□□□□ 0.04
SRP9P49458 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRP9P49458 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SRP9P49458 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRP9P49458 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRP9P49458 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRP9P49458 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.31■□□□□ 0.04
SRP9P49458 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.31■□□□□ 0.04
SRP9P49458 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.31■□□□□ 0.04
SRP9P49458 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRP9P49458 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SRP9P49458 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRP9P49458 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.31■□□□□ 0.04
SRP9P49458 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRP9P49458 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRP9P49458 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SRP9P49458 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SRP9P49458 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRP9P49458 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SRP9P49458 AC026691.1-201ENST00000602502 2017 ntBASIC15.31■□□□□ 0.04
SRP9P49458 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.31■□□□□ 0.04
SRP9P49458 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
SRP9P49458 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRP9P49458 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRP9P49458 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SRP9P49458 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRP9P49458 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SRP9P49458 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRP9P49458 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SRP9P49458 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.3■□□□□ 0.04
SRP9P49458 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.3■□□□□ 0.04
SRP9P49458 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRP9P49458 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.3■□□□□ 0.04
SRP9P49458 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRP9P49458 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SRP9P49458 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.3■□□□□ 0.04
SRP9P49458 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.3■□□□□ 0.04
SRP9P49458 CHCHD2P8-201ENST00000429873 447 ntBASIC15.3■□□□□ 0.04
SRP9P49458 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SRP9P49458 TSSC2-201ENST00000450217 709 ntBASIC15.3■□□□□ 0.04
SRP9P49458 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SRP9P49458 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SRP9P49458 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SRP9P49458 DUTP2-201ENST00000519164 463 ntBASIC15.3■□□□□ 0.04
SRP9P49458 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SRP9P49458 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SRP9P49458 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SRP9P49458 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SRP9P49458 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.3■□□□□ 0.04
SRP9P49458 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SRP9P49458 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.3■□□□□ 0.04
SRP9P49458 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRP9P49458 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
SRP9P49458 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRP9P49458 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.3■□□□□ 0.04
SRP9P49458 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SRP9P49458 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRP9P49458 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRP9P49458 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SRP9P49458 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SRP9P49458 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRP9P49458 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SRP9P49458 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.29■□□□□ 0.04
SRP9P49458 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRP9P49458 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRP9P49458 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.29■□□□□ 0.04
SRP9P49458 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRP9P49458 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.29■□□□□ 0.04
SRP9P49458 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SRP9P49458 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SRP9P49458 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRP9P49458 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SRP9P49458 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SRP9P49458 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SRP9P49458 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SRP9P49458 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRP9P49458 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRP9P49458 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRP9P49458 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRP9P49458 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms