Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN3P26045 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PTPN3P26045 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.53■□□□□ 0.4
PTPN3P26045 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN3P26045 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.53■□□□□ 0.4
PTPN3P26045 SART3-203ENST00000546611 1184 ntBASIC17.53■□□□□ 0.4
PTPN3P26045 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.53■□□□□ 0.4
PTPN3P26045 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.53■□□□□ 0.4
PTPN3P26045 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.53■□□□□ 0.4
PTPN3P26045 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PTPN3P26045 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN3P26045 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PTPN3P26045 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN3P26045 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN3P26045 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN3P26045 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.53■□□□□ 0.4
PTPN3P26045 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN3P26045 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN3P26045 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN3P26045 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN3P26045 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.52■□□□□ 0.4
PTPN3P26045 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN3P26045 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN3P26045 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN3P26045 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN3P26045 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN3P26045 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.52■□□□□ 0.4
PTPN3P26045 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN3P26045 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.52■□□□□ 0.4
PTPN3P26045 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.52■□□□□ 0.4
PTPN3P26045 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN3P26045 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.52■□□□□ 0.4
PTPN3P26045 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN3P26045 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN3P26045 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN3P26045 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.52■□□□□ 0.4
PTPN3P26045 SAPCD2P3-201ENST00000455031 850 ntBASIC17.52■□□□□ 0.4
PTPN3P26045 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN3P26045 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PTPN3P26045 AF238378.1-201ENST00000526806 358 ntBASIC17.52■□□□□ 0.4
PTPN3P26045 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN3P26045 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.52■□□□□ 0.4
PTPN3P26045 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN3P26045 AL353135.1-201ENST00000606729 504 ntBASIC17.52■□□□□ 0.4
PTPN3P26045 IFNL4P1-201ENST00000607083 540 ntBASIC17.52■□□□□ 0.4
PTPN3P26045 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PTPN3P26045 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN3P26045 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTPN3P26045 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTPN3P26045 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTPN3P26045 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTPN3P26045 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.52■□□□□ 0.39
PTPN3P26045 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PTPN3P26045 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTPN3P26045 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTPN3P26045 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PTPN3P26045 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTPN3P26045 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
PTPN3P26045 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.51■□□□□ 0.39
PTPN3P26045 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN3P26045 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PTPN3P26045 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PTPN3P26045 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN3P26045 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN3P26045 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.51■□□□□ 0.39
PTPN3P26045 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN3P26045 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN3P26045 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN3P26045 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN3P26045 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN3P26045 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN3P26045 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN3P26045 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN3P26045 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.51■□□□□ 0.39
PTPN3P26045 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.51■□□□□ 0.39
PTPN3P26045 UNC93B7-201ENST00000509439 705 ntBASIC17.51■□□□□ 0.39
PTPN3P26045 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.51■□□□□ 0.39
PTPN3P26045 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.51■□□□□ 0.39
PTPN3P26045 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.51■□□□□ 0.39
PTPN3P26045 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PTPN3P26045 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PTPN3P26045 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN3P26045 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PTPN3P26045 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN3P26045 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN3P26045 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
PTPN3P26045 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.51■□□□□ 0.39
PTPN3P26045 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN3P26045 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.51■□□□□ 0.39
PTPN3P26045 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN3P26045 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN3P26045 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN3P26045 AL590787.1-201ENST00000568856 1315 ntBASIC17.5■□□□□ 0.39
PTPN3P26045 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PTPN3P26045 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN3P26045 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.5■□□□□ 0.39
PTPN3P26045 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN3P26045 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.5■□□□□ 0.39
PTPN3P26045 AGGF1P2-201ENST00000426656 2106 ntBASIC17.5■□□□□ 0.39
PTPN3P26045 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms