Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CSB-PGBD3P0DP91 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CSB-PGBD3P0DP91 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
CSB-PGBD3P0DP91 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
CSB-PGBD3P0DP91 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CSB-PGBD3P0DP91 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CSB-PGBD3P0DP91 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CSB-PGBD3P0DP91 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CSB-PGBD3P0DP91 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC22.64■■□□□ 1.21
CSB-PGBD3P0DP91 AC069120.2-201ENST00000524091 540 ntBASIC22.64■■□□□ 1.21
CSB-PGBD3P0DP91 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
CSB-PGBD3P0DP91 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CSB-PGBD3P0DP91 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC22.64■■□□□ 1.21
CSB-PGBD3P0DP91 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC22.64■■□□□ 1.21
CSB-PGBD3P0DP91 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CSB-PGBD3P0DP91 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CSB-PGBD3P0DP91 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
CSB-PGBD3P0DP91 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
CSB-PGBD3P0DP91 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CSB-PGBD3P0DP91 MADD-208ENST00000405573 1823 ntTSL 5 BASIC22.64■■□□□ 1.21
CSB-PGBD3P0DP91 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CSB-PGBD3P0DP91 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CSB-PGBD3P0DP91 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC22.63■■□□□ 1.21
CSB-PGBD3P0DP91 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CSB-PGBD3P0DP91 AC090164.3-201ENST00000610780 2143 ntBASIC22.63■■□□□ 1.21
CSB-PGBD3P0DP91 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
CSB-PGBD3P0DP91 GNAS-203ENST00000306120 1878 ntBASIC22.63■■□□□ 1.21
CSB-PGBD3P0DP91 HLA-DQB1-201ENST00000374943 1656 ntBASIC22.63■■□□□ 1.21
CSB-PGBD3P0DP91 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
CSB-PGBD3P0DP91 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC22.63■■□□□ 1.21
CSB-PGBD3P0DP91 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CSB-PGBD3P0DP91 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC22.63■■□□□ 1.21
CSB-PGBD3P0DP91 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CSB-PGBD3P0DP91 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CSB-PGBD3P0DP91 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC22.63■■□□□ 1.21
CSB-PGBD3P0DP91 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC22.63■■□□□ 1.21
CSB-PGBD3P0DP91 AL158211.3-201ENST00000607385 239 ntBASIC22.63■■□□□ 1.21
CSB-PGBD3P0DP91 HFE2-206ENST00000634927 506 ntTSL 4 BASIC22.63■■□□□ 1.21
CSB-PGBD3P0DP91 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC22.63■■□□□ 1.21
CSB-PGBD3P0DP91 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
CSB-PGBD3P0DP91 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC22.63■■□□□ 1.21
CSB-PGBD3P0DP91 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
CSB-PGBD3P0DP91 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
CSB-PGBD3P0DP91 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC22.63■■□□□ 1.21
CSB-PGBD3P0DP91 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CSB-PGBD3P0DP91 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CSB-PGBD3P0DP91 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CSB-PGBD3P0DP91 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CSB-PGBD3P0DP91 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
CSB-PGBD3P0DP91 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CSB-PGBD3P0DP91 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
CSB-PGBD3P0DP91 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CSB-PGBD3P0DP91 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
CSB-PGBD3P0DP91 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC22.62■■□□□ 1.21
CSB-PGBD3P0DP91 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC22.62■■□□□ 1.21
CSB-PGBD3P0DP91 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC22.62■■□□□ 1.21
CSB-PGBD3P0DP91 PPP6R2P1-201ENST00000450880 1275 ntBASIC22.62■■□□□ 1.21
CSB-PGBD3P0DP91 AC097493.3-201ENST00000509725 367 ntBASIC22.62■■□□□ 1.21
CSB-PGBD3P0DP91 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CSB-PGBD3P0DP91 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CSB-PGBD3P0DP91 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CSB-PGBD3P0DP91 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CSB-PGBD3P0DP91 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
CSB-PGBD3P0DP91 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CSB-PGBD3P0DP91 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CSB-PGBD3P0DP91 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC22.62■■□□□ 1.21
CSB-PGBD3P0DP91 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CSB-PGBD3P0DP91 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CSB-PGBD3P0DP91 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC22.61■■□□□ 1.21
CSB-PGBD3P0DP91 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC22.61■■□□□ 1.21
CSB-PGBD3P0DP91 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
CSB-PGBD3P0DP91 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CSB-PGBD3P0DP91 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CSB-PGBD3P0DP91 WASH6P-202ENST00000359512 1437 ntBASIC22.61■■□□□ 1.21
CSB-PGBD3P0DP91 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC22.61■■□□□ 1.21
CSB-PGBD3P0DP91 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
CSB-PGBD3P0DP91 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CSB-PGBD3P0DP91 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CSB-PGBD3P0DP91 GATD1-206ENST00000526325 756 ntTSL 5 BASIC22.61■■□□□ 1.21
CSB-PGBD3P0DP91 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CSB-PGBD3P0DP91 CECR7-204ENST00000609932 568 ntTSL 2 BASIC22.61■■□□□ 1.21
CSB-PGBD3P0DP91 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
CSB-PGBD3P0DP91 LYSMD4-203ENST00000378904 2122 ntBASIC22.61■■□□□ 1.21
CSB-PGBD3P0DP91 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CSB-PGBD3P0DP91 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CSB-PGBD3P0DP91 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CSB-PGBD3P0DP91 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC22.61■■□□□ 1.21
CSB-PGBD3P0DP91 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CSB-PGBD3P0DP91 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC22.6■■□□□ 1.21
CSB-PGBD3P0DP91 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC22.6■■□□□ 1.21
CSB-PGBD3P0DP91 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CSB-PGBD3P0DP91 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CSB-PGBD3P0DP91 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CSB-PGBD3P0DP91 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CSB-PGBD3P0DP91 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC22.6■■□□□ 1.21
CSB-PGBD3P0DP91 AC109635.5-201ENST00000533593 962 ntBASIC22.6■■□□□ 1.21
CSB-PGBD3P0DP91 ALG1L8P-201ENST00000533887 760 ntBASIC22.6■■□□□ 1.21
CSB-PGBD3P0DP91 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
CSB-PGBD3P0DP91 COX11-202ENST00000571584 1108 ntTSL 2 BASIC22.6■■□□□ 1.21
CSB-PGBD3P0DP91 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms