Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CD48P09326 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD48P09326 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD48P09326 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.8■□□□□ 0.44
CD48P09326 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.8■□□□□ 0.44
CD48P09326 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CD48P09326 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD48P09326 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
CD48P09326 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD48P09326 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD48P09326 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CD48P09326 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD48P09326 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CD48P09326 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD48P09326 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CD48P09326 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD48P09326 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD48P09326 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.8■□□□□ 0.44
CD48P09326 SART3-203ENST00000546611 1184 ntBASIC17.8■□□□□ 0.44
CD48P09326 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.8■□□□□ 0.44
CD48P09326 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.8■□□□□ 0.44
CD48P09326 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD48P09326 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CD48P09326 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.8■□□□□ 0.44
CD48P09326 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CD48P09326 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.8■□□□□ 0.44
CD48P09326 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD48P09326 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.8■□□□□ 0.44
CD48P09326 PCDHB17P-201ENST00000539533 2393 ntBASIC17.8■□□□□ 0.44
CD48P09326 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CD48P09326 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.8■□□□□ 0.44
CD48P09326 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD48P09326 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.79■□□□□ 0.44
CD48P09326 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.79■□□□□ 0.44
CD48P09326 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CD48P09326 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD48P09326 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CD48P09326 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD48P09326 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD48P09326 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.79■□□□□ 0.44
CD48P09326 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD48P09326 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.79■□□□□ 0.44
CD48P09326 AL356309.3-201ENST00000624132 1934 ntBASIC17.79■□□□□ 0.44
CD48P09326 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD48P09326 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.79■□□□□ 0.44
CD48P09326 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CD48P09326 RBM17P3-201ENST00000417687 1192 ntBASIC17.79■□□□□ 0.44
CD48P09326 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.79■□□□□ 0.44
CD48P09326 FGFR3P6-201ENST00000457012 610 ntBASIC17.79■□□□□ 0.44
CD48P09326 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CD48P09326 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD48P09326 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CD48P09326 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.79■□□□□ 0.44
CD48P09326 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.79■□□□□ 0.44
CD48P09326 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.79■□□□□ 0.44
CD48P09326 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.79■□□□□ 0.44
CD48P09326 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.79■□□□□ 0.44
CD48P09326 AL355877.3-201ENST00000622820 899 ntBASIC17.79■□□□□ 0.44
CD48P09326 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.79■□□□□ 0.44
CD48P09326 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD48P09326 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CD48P09326 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.79■□□□□ 0.44
CD48P09326 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD48P09326 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CD48P09326 PCDHA14-201ENST00000506751 2298 ntBASIC17.79■□□□□ 0.44
CD48P09326 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
CD48P09326 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CD48P09326 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD48P09326 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.79■□□□□ 0.44
CD48P09326 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD48P09326 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.79■□□□□ 0.44
CD48P09326 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD48P09326 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CD48P09326 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD48P09326 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.79■□□□□ 0.44
CD48P09326 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CD48P09326 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.78■□□□□ 0.44
CD48P09326 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CD48P09326 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD48P09326 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.78■□□□□ 0.44
CD48P09326 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.78■□□□□ 0.44
CD48P09326 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.78■□□□□ 0.44
CD48P09326 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD48P09326 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CD48P09326 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CD48P09326 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.78■□□□□ 0.44
CD48P09326 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.78■□□□□ 0.44
CD48P09326 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD48P09326 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CD48P09326 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CD48P09326 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD48P09326 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD48P09326 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD48P09326 PRYP5-201ENST00000451909 266 ntBASIC17.78■□□□□ 0.44
CD48P09326 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.78■□□□□ 0.44
CD48P09326 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.78■□□□□ 0.44
CD48P09326 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.78■□□□□ 0.44
CD48P09326 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.78■□□□□ 0.44
CD48P09326 AC008608.2-201ENST00000606089 416 ntBASIC17.78■□□□□ 0.44
CD48P09326 REXO1L6P-202ENST00000619970 1078 ntBASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms