Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TPM3P06753 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TPM3P06753 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TPM3P06753 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19.32■□□□□ 0.68
TPM3P06753 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TPM3P06753 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
TPM3P06753 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TPM3P06753 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TPM3P06753 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TPM3P06753 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.32■□□□□ 0.68
TPM3P06753 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TPM3P06753 LINC00554-201ENST00000564841 3011 ntBASIC19.32■□□□□ 0.68
TPM3P06753 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TPM3P06753 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TPM3P06753 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.32■□□□□ 0.68
TPM3P06753 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.32■□□□□ 0.68
TPM3P06753 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TPM3P06753 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.32■□□□□ 0.68
TPM3P06753 TSPY12P-201ENST00000421279 868 ntBASIC19.32■□□□□ 0.68
TPM3P06753 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.32■□□□□ 0.68
TPM3P06753 TSPY7P-201ENST00000431358 1114 ntBASIC19.32■□□□□ 0.68
TPM3P06753 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.32■□□□□ 0.68
TPM3P06753 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TPM3P06753 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TPM3P06753 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.32■□□□□ 0.68
TPM3P06753 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TPM3P06753 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TPM3P06753 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.32■□□□□ 0.68
TPM3P06753 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.32■□□□□ 0.68
TPM3P06753 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TPM3P06753 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC19.32■□□□□ 0.68
TPM3P06753 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TPM3P06753 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TPM3P06753 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TPM3P06753 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
TPM3P06753 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.32■□□□□ 0.68
TPM3P06753 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TPM3P06753 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TPM3P06753 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TPM3P06753 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TPM3P06753 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TPM3P06753 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TPM3P06753 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TPM3P06753 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TPM3P06753 KRT17P2-201ENST00000300992 1314 ntBASIC19.31■□□□□ 0.68
TPM3P06753 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TPM3P06753 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TPM3P06753 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TPM3P06753 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TPM3P06753 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TPM3P06753 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TPM3P06753 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TPM3P06753 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
TPM3P06753 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TPM3P06753 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TPM3P06753 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.31■□□□□ 0.68
TPM3P06753 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TPM3P06753 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TPM3P06753 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.31■□□□□ 0.68
TPM3P06753 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.31■□□□□ 0.68
TPM3P06753 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.31■□□□□ 0.68
TPM3P06753 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.31■□□□□ 0.68
TPM3P06753 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.31■□□□□ 0.68
TPM3P06753 NAPSB-206ENST00000562112 1266 ntBASIC19.31■□□□□ 0.68
TPM3P06753 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TPM3P06753 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TPM3P06753 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TPM3P06753 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TPM3P06753 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.31■□□□□ 0.68
TPM3P06753 AC093525.9-201ENST00000624961 1746 ntBASIC19.31■□□□□ 0.68
TPM3P06753 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TPM3P06753 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TPM3P06753 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TPM3P06753 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TPM3P06753 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TPM3P06753 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TPM3P06753 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TPM3P06753 AC092171.3-201ENST00000610122 2651 ntBASIC19.3■□□□□ 0.68
TPM3P06753 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TPM3P06753 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC19.3■□□□□ 0.68
TPM3P06753 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TPM3P06753 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TPM3P06753 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.3■□□□□ 0.68
TPM3P06753 AC092053.1-201ENST00000605787 1936 ntBASIC19.3■□□□□ 0.68
TPM3P06753 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.3■□□□□ 0.68
TPM3P06753 INGX-201ENST00000359239 846 ntBASIC19.3■□□□□ 0.68
TPM3P06753 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
TPM3P06753 AC124947.2-201ENST00000547118 1133 ntBASIC19.3■□□□□ 0.68
TPM3P06753 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.3■□□□□ 0.68
TPM3P06753 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TPM3P06753 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TPM3P06753 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TPM3P06753 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TPM3P06753 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.3■□□□□ 0.68
TPM3P06753 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC19.3■□□□□ 0.68
TPM3P06753 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TPM3P06753 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TPM3P06753 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC19.3■□□□□ 0.68
TPM3P06753 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TPM3P06753 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms