Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CBX6O95503 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CBX6O95503 SPDYE15P-201ENST00000424157 909 ntBASIC17.2■□□□□ 0.34
CBX6O95503 SPDYE13P-201ENST00000445314 798 ntBASIC17.2■□□□□ 0.34
CBX6O95503 FDX1P1-201ENST00000449115 551 ntBASIC17.2■□□□□ 0.34
CBX6O95503 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.2■□□□□ 0.34
CBX6O95503 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.2■□□□□ 0.34
CBX6O95503 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.2■□□□□ 0.34
CBX6O95503 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.2■□□□□ 0.34
CBX6O95503 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.2■□□□□ 0.34
CBX6O95503 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.2■□□□□ 0.34
CBX6O95503 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.2■□□□□ 0.34
CBX6O95503 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CBX6O95503 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.2■□□□□ 0.34
CBX6O95503 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.2■□□□□ 0.34
CBX6O95503 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.2■□□□□ 0.34
CBX6O95503 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CBX6O95503 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CBX6O95503 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.2■□□□□ 0.34
CBX6O95503 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX6O95503 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CBX6O95503 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.19■□□□□ 0.34
CBX6O95503 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX6O95503 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX6O95503 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX6O95503 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.19■□□□□ 0.34
CBX6O95503 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX6O95503 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CBX6O95503 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CBX6O95503 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX6O95503 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX6O95503 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX6O95503 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CBX6O95503 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX6O95503 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX6O95503 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CBX6O95503 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX6O95503 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.19■□□□□ 0.34
CBX6O95503 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CBX6O95503 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.19■□□□□ 0.34
CBX6O95503 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX6O95503 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.19■□□□□ 0.34
CBX6O95503 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX6O95503 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX6O95503 KRT18P23-201ENST00000435622 1283 ntBASIC17.19■□□□□ 0.34
CBX6O95503 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.19■□□□□ 0.34
CBX6O95503 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.19■□□□□ 0.34
CBX6O95503 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.19■□□□□ 0.34
CBX6O95503 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
CBX6O95503 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CBX6O95503 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.19■□□□□ 0.34
CBX6O95503 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX6O95503 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX6O95503 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CBX6O95503 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX6O95503 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CBX6O95503 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.19■□□□□ 0.34
CBX6O95503 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CBX6O95503 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX6O95503 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.18■□□□□ 0.34
CBX6O95503 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CBX6O95503 LYSMD4-203ENST00000378904 2122 ntBASIC17.18■□□□□ 0.34
CBX6O95503 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CBX6O95503 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CBX6O95503 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBX6O95503 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CBX6O95503 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CBX6O95503 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.18■□□□□ 0.34
CBX6O95503 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CBX6O95503 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CBX6O95503 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBX6O95503 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBX6O95503 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBX6O95503 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBX6O95503 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.18■□□□□ 0.34
CBX6O95503 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CBX6O95503 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.18■□□□□ 0.34
CBX6O95503 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.18■□□□□ 0.34
CBX6O95503 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBX6O95503 PRELID1P1-202ENST00000567272 903 ntBASIC17.18■□□□□ 0.34
CBX6O95503 MIR4674-201ENST00000582457 87 ntBASIC17.18■□□□□ 0.34
CBX6O95503 AC092329.2-201ENST00000598402 547 ntBASIC17.18■□□□□ 0.34
CBX6O95503 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBX6O95503 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CBX6O95503 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBX6O95503 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBX6O95503 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
CBX6O95503 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.18■□□□□ 0.34
CBX6O95503 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.18■□□□□ 0.34
CBX6O95503 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CBX6O95503 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CBX6O95503 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBX6O95503 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CBX6O95503 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBX6O95503 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBX6O95503 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CBX6O95503 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CBX6O95503 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBX6O95503 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CBX6O95503 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms