Protein–RNA interactions for Protein: O94888

UBXN7, UBX domain-containing protein 7, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN7O94888 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.7■□□□□ 0.26
UBXN7O94888 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.7■□□□□ 0.26
UBXN7O94888 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.7■□□□□ 0.26
UBXN7O94888 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
UBXN7O94888 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBXN7O94888 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
UBXN7O94888 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBXN7O94888 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBXN7O94888 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBXN7O94888 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBXN7O94888 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBXN7O94888 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBXN7O94888 AL590787.1-201ENST00000568856 1315 ntBASIC16.7■□□□□ 0.26
UBXN7O94888 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBXN7O94888 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
UBXN7O94888 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBXN7O94888 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBXN7O94888 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.69■□□□□ 0.26
UBXN7O94888 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
UBXN7O94888 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBXN7O94888 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBXN7O94888 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.69■□□□□ 0.26
UBXN7O94888 LYSMD4-203ENST00000378904 2122 ntBASIC16.69■□□□□ 0.26
UBXN7O94888 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
UBXN7O94888 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
UBXN7O94888 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBXN7O94888 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBXN7O94888 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBXN7O94888 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
UBXN7O94888 MRPL20P1-201ENST00000400819 433 ntBASIC16.69■□□□□ 0.26
UBXN7O94888 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBXN7O94888 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.69■□□□□ 0.26
UBXN7O94888 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.69■□□□□ 0.26
UBXN7O94888 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.69■□□□□ 0.26
UBXN7O94888 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.69■□□□□ 0.26
UBXN7O94888 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
UBXN7O94888 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBXN7O94888 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
UBXN7O94888 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBXN7O94888 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.69■□□□□ 0.26
UBXN7O94888 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
UBXN7O94888 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.69■□□□□ 0.26
UBXN7O94888 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBXN7O94888 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBXN7O94888 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.69■□□□□ 0.26
UBXN7O94888 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBXN7O94888 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBXN7O94888 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBXN7O94888 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.69■□□□□ 0.26
UBXN7O94888 AC133963.1-201ENST00000504166 1679 ntBASIC16.69■□□□□ 0.26
UBXN7O94888 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UBXN7O94888 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBXN7O94888 PI4KAP1-204ENST00000612579 1703 ntBASIC16.68■□□□□ 0.26
UBXN7O94888 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBXN7O94888 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.68■□□□□ 0.26
UBXN7O94888 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
UBXN7O94888 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBXN7O94888 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
UBXN7O94888 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
UBXN7O94888 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.68■□□□□ 0.26
UBXN7O94888 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.68■□□□□ 0.26
UBXN7O94888 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.68■□□□□ 0.26
UBXN7O94888 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.68■□□□□ 0.26
UBXN7O94888 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
UBXN7O94888 MIR1233-2-201ENST00000408138 82 ntBASIC16.68■□□□□ 0.26
UBXN7O94888 MIR1233-1-201ENST00000408722 82 ntBASIC16.68■□□□□ 0.26
UBXN7O94888 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UBXN7O94888 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.68■□□□□ 0.26
UBXN7O94888 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
UBXN7O94888 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.68■□□□□ 0.26
UBXN7O94888 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.68■□□□□ 0.26
UBXN7O94888 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.68■□□□□ 0.26
UBXN7O94888 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.68■□□□□ 0.26
UBXN7O94888 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.68■□□□□ 0.26
UBXN7O94888 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.68■□□□□ 0.26
UBXN7O94888 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.68■□□□□ 0.26
UBXN7O94888 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.68■□□□□ 0.26
UBXN7O94888 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
UBXN7O94888 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.68■□□□□ 0.26
UBXN7O94888 AC010654.1-201ENST00000615722 808 ntBASIC16.68■□□□□ 0.26
UBXN7O94888 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBXN7O94888 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.68■□□□□ 0.26
UBXN7O94888 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBXN7O94888 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.68■□□□□ 0.26
UBXN7O94888 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.68■□□□□ 0.26
UBXN7O94888 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
UBXN7O94888 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
UBXN7O94888 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBXN7O94888 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBXN7O94888 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UBXN7O94888 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.67■□□□□ 0.26
UBXN7O94888 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBXN7O94888 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.67■□□□□ 0.26
UBXN7O94888 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
UBXN7O94888 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.67■□□□□ 0.26
UBXN7O94888 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.67■□□□□ 0.26
UBXN7O94888 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.67■□□□□ 0.26
UBXN7O94888 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.67■□□□□ 0.26
UBXN7O94888 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.67■□□□□ 0.26
UBXN7O94888 AC002347.1-201ENST00000569543 541 ntBASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms