Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.76■□□□□ 0.27
HDAC3O15379 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
HDAC3O15379 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HDAC3O15379 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.76■□□□□ 0.27
HDAC3O15379 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.76■□□□□ 0.27
HDAC3O15379 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
HDAC3O15379 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
HDAC3O15379 HBZP1-201ENST00000354915 429 ntBASIC16.76■□□□□ 0.27
HDAC3O15379 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HDAC3O15379 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.76■□□□□ 0.27
HDAC3O15379 AC103564.2-201ENST00000432853 1299 ntBASIC16.76■□□□□ 0.27
HDAC3O15379 ATP5G1P1-201ENST00000448724 379 ntBASIC16.76■□□□□ 0.27
HDAC3O15379 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HDAC3O15379 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HDAC3O15379 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HDAC3O15379 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HDAC3O15379 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HDAC3O15379 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HDAC3O15379 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HDAC3O15379 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HDAC3O15379 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HDAC3O15379 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HDAC3O15379 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HDAC3O15379 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HDAC3O15379 HLA-A-202ENST00000376806 1854 ntBASIC16.76■□□□□ 0.27
HDAC3O15379 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HDAC3O15379 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HDAC3O15379 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HDAC3O15379 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
HDAC3O15379 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HDAC3O15379 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.75■□□□□ 0.27
HDAC3O15379 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.75■□□□□ 0.27
HDAC3O15379 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HDAC3O15379 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
HDAC3O15379 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HDAC3O15379 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HDAC3O15379 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
HDAC3O15379 GPR89P-201ENST00000407924 1495 ntBASIC16.75■□□□□ 0.27
HDAC3O15379 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.75■□□□□ 0.27
HDAC3O15379 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HDAC3O15379 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
HDAC3O15379 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.75■□□□□ 0.27
HDAC3O15379 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.75■□□□□ 0.27
HDAC3O15379 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.75■□□□□ 0.27
HDAC3O15379 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.75■□□□□ 0.27
HDAC3O15379 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HDAC3O15379 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HDAC3O15379 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HDAC3O15379 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HDAC3O15379 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
HDAC3O15379 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HDAC3O15379 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HDAC3O15379 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
HDAC3O15379 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
HDAC3O15379 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HDAC3O15379 AP002490.2-201ENST00000524791 560 ntBASIC16.75■□□□□ 0.27
HDAC3O15379 AC010203.1-204ENST00000548782 407 ntBASIC16.75■□□□□ 0.27
HDAC3O15379 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.75■□□□□ 0.27
HDAC3O15379 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.75■□□□□ 0.27
HDAC3O15379 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HDAC3O15379 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.75■□□□□ 0.27
HDAC3O15379 KRT8P10-201ENST00000450021 1447 ntBASIC16.75■□□□□ 0.27
HDAC3O15379 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.75■□□□□ 0.27
HDAC3O15379 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.75■□□□□ 0.27
HDAC3O15379 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HDAC3O15379 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
HDAC3O15379 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HDAC3O15379 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.75■□□□□ 0.27
HDAC3O15379 AL135999.2-201ENST00000622438 1686 ntBASIC16.75■□□□□ 0.27
HDAC3O15379 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.75■□□□□ 0.27
HDAC3O15379 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.75■□□□□ 0.27
HDAC3O15379 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.75■□□□□ 0.27
HDAC3O15379 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.75■□□□□ 0.27
HDAC3O15379 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HDAC3O15379 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HDAC3O15379 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HDAC3O15379 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.74■□□□□ 0.27
HDAC3O15379 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HDAC3O15379 Z83836.1-201ENST00000624605 1642 ntBASIC16.74■□□□□ 0.27
HDAC3O15379 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.74■□□□□ 0.27
HDAC3O15379 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HDAC3O15379 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.74■□□□□ 0.27
HDAC3O15379 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HDAC3O15379 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HDAC3O15379 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HDAC3O15379 AC125634.1-201ENST00000438758 1403 ntBASIC16.74■□□□□ 0.27
HDAC3O15379 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HDAC3O15379 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.74■□□□□ 0.27
HDAC3O15379 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
HDAC3O15379 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HDAC3O15379 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HDAC3O15379 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
HDAC3O15379 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HDAC3O15379 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HDAC3O15379 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HDAC3O15379 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HDAC3O15379 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HDAC3O15379 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.74■□□□□ 0.27
HDAC3O15379 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.74■□□□□ 0.27
HDAC3O15379 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms