Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFA1O15239 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
NDUFA1O15239 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC11.81□□□□□ -0.52
NDUFA1O15239 AC005104.2-201ENST00000427818 678 ntBASIC11.81□□□□□ -0.52
NDUFA1O15239 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC11.81□□□□□ -0.52
NDUFA1O15239 ECEL1P2-202ENST00000465689 757 ntBASIC11.81□□□□□ -0.52
NDUFA1O15239 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC11.81□□□□□ -0.52
NDUFA1O15239 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
NDUFA1O15239 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFA1O15239 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC11.81□□□□□ -0.52
NDUFA1O15239 AC010947.1-201ENST00000623454 693 ntBASIC11.81□□□□□ -0.52
NDUFA1O15239 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC11.81□□□□□ -0.52
NDUFA1O15239 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFA1O15239 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFA1O15239 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC11.81□□□□□ -0.52
NDUFA1O15239 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFA1O15239 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFA1O15239 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFA1O15239 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC11.81□□□□□ -0.52
NDUFA1O15239 CYP2D8P-201ENST00000433633 1490 ntBASIC11.81□□□□□ -0.52
NDUFA1O15239 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFA1O15239 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
NDUFA1O15239 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFA1O15239 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFA1O15239 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
NDUFA1O15239 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFA1O15239 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFA1O15239 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFA1O15239 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFA1O15239 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC11.81□□□□□ -0.52
NDUFA1O15239 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC11.81□□□□□ -0.52
NDUFA1O15239 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
NDUFA1O15239 FUK-207ENST00000571514 3054 ntTSL 2 BASIC11.8□□□□□ -0.52
NDUFA1O15239 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
NDUFA1O15239 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
NDUFA1O15239 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NDUFA1O15239 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NDUFA1O15239 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NDUFA1O15239 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NDUFA1O15239 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NDUFA1O15239 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC11.8□□□□□ -0.52
NDUFA1O15239 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NDUFA1O15239 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
NDUFA1O15239 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
NDUFA1O15239 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC11.8□□□□□ -0.52
NDUFA1O15239 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NDUFA1O15239 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
NDUFA1O15239 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NDUFA1O15239 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NDUFA1O15239 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
NDUFA1O15239 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC11.8□□□□□ -0.52
NDUFA1O15239 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC11.8□□□□□ -0.52
NDUFA1O15239 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC11.8□□□□□ -0.52
NDUFA1O15239 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC11.8□□□□□ -0.52
NDUFA1O15239 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC11.8□□□□□ -0.52
NDUFA1O15239 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC11.8□□□□□ -0.52
NDUFA1O15239 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
NDUFA1O15239 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC11.8□□□□□ -0.52
NDUFA1O15239 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC11.8□□□□□ -0.52
NDUFA1O15239 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
NDUFA1O15239 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC11.8□□□□□ -0.52
NDUFA1O15239 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC11.8□□□□□ -0.52
NDUFA1O15239 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
NDUFA1O15239 FAM87A-204ENST00000613235 858 ntBASIC11.8□□□□□ -0.52
NDUFA1O15239 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
NDUFA1O15239 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC11.8□□□□□ -0.52
NDUFA1O15239 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NDUFA1O15239 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NDUFA1O15239 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NDUFA1O15239 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
NDUFA1O15239 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
NDUFA1O15239 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NDUFA1O15239 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NDUFA1O15239 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
NDUFA1O15239 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NDUFA1O15239 RNF216P1-203ENST00000404404 2427 ntBASIC11.8□□□□□ -0.52
NDUFA1O15239 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
NDUFA1O15239 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NDUFA1O15239 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
NDUFA1O15239 KRT18P22-201ENST00000402024 1347 ntBASIC11.8□□□□□ -0.52
NDUFA1O15239 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NDUFA1O15239 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NDUFA1O15239 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
NDUFA1O15239 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
NDUFA1O15239 BX276092.7-203ENST00000637198 1536 ntBASIC11.8□□□□□ -0.52
NDUFA1O15239 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NDUFA1O15239 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NDUFA1O15239 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NDUFA1O15239 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NDUFA1O15239 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NDUFA1O15239 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
NDUFA1O15239 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA1O15239 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA1O15239 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA1O15239 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC11.79□□□□□ -0.52
NDUFA1O15239 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
NDUFA1O15239 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFA1O15239 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
NDUFA1O15239 KRT8P9-201ENST00000558927 1449 ntBASIC11.79□□□□□ -0.52
NDUFA1O15239 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms