Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.59■□□□□ 0.25
AP4B1Q9Y6B7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP4B1Q9Y6B7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.59■□□□□ 0.25
AP4B1Q9Y6B7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AP4B1Q9Y6B7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AP4B1Q9Y6B7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AP4B1Q9Y6B7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP4B1Q9Y6B7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.59■□□□□ 0.25
AP4B1Q9Y6B7 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP4B1Q9Y6B7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.58■□□□□ 0.25
AP4B1Q9Y6B7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
AP4B1Q9Y6B7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
AP4B1Q9Y6B7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.58■□□□□ 0.25
AP4B1Q9Y6B7 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
AP4B1Q9Y6B7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
AP4B1Q9Y6B7 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
AP4B1Q9Y6B7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
AP4B1Q9Y6B7 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
AP4B1Q9Y6B7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
AP4B1Q9Y6B7 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
AP4B1Q9Y6B7 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP4B1Q9Y6B7 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
AP4B1Q9Y6B7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP4B1Q9Y6B7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP4B1Q9Y6B7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP4B1Q9Y6B7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
AP4B1Q9Y6B7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
AP4B1Q9Y6B7 DUTP2-201ENST00000519164 463 ntBASIC16.58■□□□□ 0.24
AP4B1Q9Y6B7 AL136038.3-201ENST00000561909 1096 ntBASIC16.58■□□□□ 0.24
AP4B1Q9Y6B7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.58■□□□□ 0.24
AP4B1Q9Y6B7 AC083849.1-201ENST00000615227 514 ntBASIC16.58■□□□□ 0.24
AP4B1Q9Y6B7 AC079602.3-201ENST00000623931 403 ntBASIC16.58■□□□□ 0.24
AP4B1Q9Y6B7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
AP4B1Q9Y6B7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.58■□□□□ 0.24
AP4B1Q9Y6B7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP4B1Q9Y6B7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.58■□□□□ 0.24
AP4B1Q9Y6B7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.58■□□□□ 0.24
AP4B1Q9Y6B7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
AP4B1Q9Y6B7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
AP4B1Q9Y6B7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.58■□□□□ 0.24
AP4B1Q9Y6B7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
AP4B1Q9Y6B7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP4B1Q9Y6B7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
AP4B1Q9Y6B7 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
AP4B1Q9Y6B7 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP4B1Q9Y6B7 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP4B1Q9Y6B7 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP4B1Q9Y6B7 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP4B1Q9Y6B7 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP4B1Q9Y6B7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
AP4B1Q9Y6B7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP4B1Q9Y6B7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP4B1Q9Y6B7 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.57■□□□□ 0.24
AP4B1Q9Y6B7 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.57■□□□□ 0.24
AP4B1Q9Y6B7 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
AP4B1Q9Y6B7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
AP4B1Q9Y6B7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.57■□□□□ 0.24
AP4B1Q9Y6B7 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
AP4B1Q9Y6B7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.57■□□□□ 0.24
AP4B1Q9Y6B7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP4B1Q9Y6B7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
AP4B1Q9Y6B7 AC116353.5-201ENST00000638148 1699 ntBASIC16.57■□□□□ 0.24
AP4B1Q9Y6B7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
AP4B1Q9Y6B7 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP4B1Q9Y6B7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP4B1Q9Y6B7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
AP4B1Q9Y6B7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
AP4B1Q9Y6B7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.57■□□□□ 0.24
AP4B1Q9Y6B7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.57■□□□□ 0.24
AP4B1Q9Y6B7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.57■□□□□ 0.24
AP4B1Q9Y6B7 LINC01451-201ENST00000623792 534 ntBASIC16.57■□□□□ 0.24
AP4B1Q9Y6B7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.57■□□□□ 0.24
AP4B1Q9Y6B7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.57■□□□□ 0.24
AP4B1Q9Y6B7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP4B1Q9Y6B7 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP4B1Q9Y6B7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.57■□□□□ 0.24
AP4B1Q9Y6B7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.57■□□□□ 0.24
AP4B1Q9Y6B7 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
AP4B1Q9Y6B7 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
AP4B1Q9Y6B7 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP4B1Q9Y6B7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 AC092171.3-201ENST00000610122 2651 ntBASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 AC005052.1-201ENST00000625181 2492 ntBASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP4B1Q9Y6B7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms