Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 ISCU-212ENST00000547005 795 ntTSL 3 BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 SP2-202ENST00000613139 908 ntTSL 5 BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 AC006538.1-201ENST00000567905 1585 ntBASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAPPC1Q9Y5R8 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 KRT18P11-201ENST00000435214 1283 ntBASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 Z85996.1-201ENST00000494644 937 ntBASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms