Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC11.77□□□□□ -0.52
LINC00588Q9Y4M8 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
LINC00588Q9Y4M8 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
LINC00588Q9Y4M8 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LINC00588Q9Y4M8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LINC00588Q9Y4M8 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
LINC00588Q9Y4M8 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LINC00588Q9Y4M8 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 AL513190.1-201ENST00000621254 727 ntBASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 AC004877.2-201ENST00000623941 599 ntBASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 BCAR1-209ENST00000546196 1340 ntBASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00588Q9Y4M8 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 MCCD1P2-201ENST00000423228 335 ntBASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 AC087163.2-201ENST00000457299 853 ntBASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 CXCL1P1-201ENST00000502804 216 ntBASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 DHDH-204ENST00000523250 634 ntTSL 5 BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 AQP6-205ENST00000618286 829 ntTSL 5 BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 AL691403.2-201ENST00000618460 490 ntBASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 AC055717.3-201ENST00000622967 595 ntBASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 AC007064.4-201ENST00000637740 555 ntBASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 NOC2LP2-201ENST00000407594 1944 ntBASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 PC-214ENST00000628663 1470 ntTSL 5 BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00588Q9Y4M8 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00588Q9Y4M8 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00588Q9Y4M8 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00588Q9Y4M8 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
LINC00588Q9Y4M8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
LINC00588Q9Y4M8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00588Q9Y4M8 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC11.75□□□□□ -0.53
LINC00588Q9Y4M8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00588Q9Y4M8 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00588Q9Y4M8 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00588Q9Y4M8 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC11.75□□□□□ -0.53
LINC00588Q9Y4M8 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms